Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LdlrP35951 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LdlrP35951 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LdlrP35951 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LdlrP35951 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LdlrP35951 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LdlrP35951 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LdlrP35951 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LdlrP35951 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LdlrP35951 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LdlrP35951 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LdlrP35951 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
LdlrP35951 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LdlrP35951 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LdlrP35951 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LdlrP35951 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
LdlrP35951 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LdlrP35951 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LdlrP35951 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.66■□□□□ 0.42
LdlrP35951 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.66■□□□□ 0.42
LdlrP35951 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LdlrP35951 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LdlrP35951 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LdlrP35951 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LdlrP35951 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LdlrP35951 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LdlrP35951 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LdlrP35951 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LdlrP35951 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LdlrP35951 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LdlrP35951 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LdlrP35951 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LdlrP35951 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LdlrP35951 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LdlrP35951 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LdlrP35951 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LdlrP35951 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
LdlrP35951 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LdlrP35951 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LdlrP35951 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LdlrP35951 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LdlrP35951 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LdlrP35951 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LdlrP35951 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LdlrP35951 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LdlrP35951 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LdlrP35951 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LdlrP35951 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LdlrP35951 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LdlrP35951 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
LdlrP35951 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LdlrP35951 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.64■□□□□ 0.41
LdlrP35951 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LdlrP35951 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LdlrP35951 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
LdlrP35951 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LdlrP35951 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LdlrP35951 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
LdlrP35951 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LdlrP35951 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LdlrP35951 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LdlrP35951 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
LdlrP35951 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LdlrP35951 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LdlrP35951 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LdlrP35951 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LdlrP35951 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LdlrP35951 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LdlrP35951 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LdlrP35951 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LdlrP35951 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
LdlrP35951 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.63■□□□□ 0.41
LdlrP35951 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.63■□□□□ 0.41
LdlrP35951 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LdlrP35951 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.63■□□□□ 0.41
LdlrP35951 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
LdlrP35951 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LdlrP35951 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LdlrP35951 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.63■□□□□ 0.41
LdlrP35951 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
LdlrP35951 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
LdlrP35951 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LdlrP35951 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LdlrP35951 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LdlrP35951 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LdlrP35951 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LdlrP35951 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LdlrP35951 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LdlrP35951 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LdlrP35951 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LdlrP35951 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LdlrP35951 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LdlrP35951 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LdlrP35951 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.62■□□□□ 0.41
LdlrP35951 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.62■□□□□ 0.41
LdlrP35951 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.62■□□□□ 0.41
LdlrP35951 Gm22325-201ENSMUST00000158904 308 ntBASIC17.62■□□□□ 0.41
LdlrP35951 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.62■□□□□ 0.41
LdlrP35951 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LdlrP35951 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms