Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nckap1P28660 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Nckap1P28660 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nckap1P28660 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nckap1P28660 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.67■□□□□ 0.42
Nckap1P28660 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.67■□□□□ 0.42
Nckap1P28660 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nckap1P28660 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nckap1P28660 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Nckap1P28660 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nckap1P28660 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Nckap1P28660 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nckap1P28660 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nckap1P28660 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nckap1P28660 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nckap1P28660 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nckap1P28660 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.66■□□□□ 0.42
Nckap1P28660 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nckap1P28660 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nckap1P28660 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nckap1P28660 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nckap1P28660 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.66■□□□□ 0.42
Nckap1P28660 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.66■□□□□ 0.42
Nckap1P28660 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nckap1P28660 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nckap1P28660 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nckap1P28660 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nckap1P28660 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nckap1P28660 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nckap1P28660 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nckap1P28660 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nckap1P28660 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Nckap1P28660 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nckap1P28660 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nckap1P28660 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nckap1P28660 Gm10231-201ENSMUST00000181584 441 ntBASIC17.65■□□□□ 0.42
Nckap1P28660 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nckap1P28660 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nckap1P28660 Gm10175-202ENSMUST00000208752 441 ntBASIC17.65■□□□□ 0.42
Nckap1P28660 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nckap1P28660 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nckap1P28660 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nckap1P28660 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nckap1P28660 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nckap1P28660 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nckap1P28660 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nckap1P28660 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nckap1P28660 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nckap1P28660 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.64■□□□□ 0.42
Nckap1P28660 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nckap1P28660 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nckap1P28660 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nckap1P28660 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nckap1P28660 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nckap1P28660 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nckap1P28660 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nckap1P28660 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nckap1P28660 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.64■□□□□ 0.41
Nckap1P28660 Gm11539-201ENSMUST00000119837 557 ntBASIC17.64■□□□□ 0.41
Nckap1P28660 Gm13436-201ENSMUST00000120418 567 ntBASIC17.64■□□□□ 0.41
Nckap1P28660 Gm13559-201ENSMUST00000120476 863 ntBASIC17.64■□□□□ 0.41
Nckap1P28660 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.64■□□□□ 0.41
Nckap1P28660 Gm10517-202ENSMUST00000192970 758 ntBASIC17.64■□□□□ 0.41
Nckap1P28660 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.64■□□□□ 0.41
Nckap1P28660 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nckap1P28660 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.64■□□□□ 0.41
Nckap1P28660 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nckap1P28660 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Nckap1P28660 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nckap1P28660 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nckap1P28660 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Nckap1P28660 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nckap1P28660 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.63■□□□□ 0.41
Nckap1P28660 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Nckap1P28660 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nckap1P28660 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.63■□□□□ 0.41
Nckap1P28660 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nckap1P28660 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nckap1P28660 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nckap1P28660 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nckap1P28660 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nckap1P28660 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nckap1P28660 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nckap1P28660 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Nckap1P28660 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.63■□□□□ 0.41
Nckap1P28660 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Nckap1P28660 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nckap1P28660 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Nckap1P28660 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nckap1P28660 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nckap1P28660 Gm12085-201ENSMUST00000119263 940 ntBASIC17.62■□□□□ 0.41
Nckap1P28660 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Nckap1P28660 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.62■□□□□ 0.41
Nckap1P28660 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nckap1P28660 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nckap1P28660 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nckap1P28660 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nckap1P28660 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Nckap1P28660 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nckap1P28660 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms