Protein–RNA interactions for Protein: P28028

Braf, Serine/threonine-protein kinase B-raf, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BrafP28028 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
BrafP28028 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BrafP28028 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
BrafP28028 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BrafP28028 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BrafP28028 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.35■□□□□ 0.37
BrafP28028 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BrafP28028 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.35■□□□□ 0.37
BrafP28028 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.35■□□□□ 0.37
BrafP28028 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
BrafP28028 Gm6365-201ENSMUST00000054711 744 ntBASIC17.35■□□□□ 0.37
BrafP28028 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BrafP28028 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
BrafP28028 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.35■□□□□ 0.37
BrafP28028 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
BrafP28028 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BrafP28028 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BrafP28028 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.35■□□□□ 0.37
BrafP28028 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BrafP28028 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BrafP28028 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
BrafP28028 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BrafP28028 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BrafP28028 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.34■□□□□ 0.37
BrafP28028 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BrafP28028 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.34■□□□□ 0.37
BrafP28028 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
BrafP28028 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.34■□□□□ 0.37
BrafP28028 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BrafP28028 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.34■□□□□ 0.37
BrafP28028 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.34■□□□□ 0.37
BrafP28028 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BrafP28028 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
BrafP28028 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BrafP28028 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BrafP28028 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
BrafP28028 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
BrafP28028 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
BrafP28028 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
BrafP28028 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BrafP28028 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
BrafP28028 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
BrafP28028 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BrafP28028 Gm7290-201ENSMUST00000104990 617 ntBASIC17.33■□□□□ 0.36
BrafP28028 Gm12918-201ENSMUST00000120234 636 ntBASIC17.33■□□□□ 0.36
BrafP28028 Gm15710-201ENSMUST00000121821 636 ntBASIC17.33■□□□□ 0.36
BrafP28028 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BrafP28028 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BrafP28028 Gm5075-201ENSMUST00000196916 622 ntBASIC17.33■□□□□ 0.36
BrafP28028 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.33■□□□□ 0.36
BrafP28028 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.33■□□□□ 0.36
BrafP28028 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
BrafP28028 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.33■□□□□ 0.36
BrafP28028 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.33■□□□□ 0.36
BrafP28028 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
BrafP28028 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
BrafP28028 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BrafP28028 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
BrafP28028 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
BrafP28028 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
BrafP28028 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BrafP28028 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BrafP28028 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.32■□□□□ 0.36
BrafP28028 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
BrafP28028 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.32■□□□□ 0.36
BrafP28028 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.32■□□□□ 0.36
BrafP28028 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BrafP28028 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BrafP28028 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BrafP28028 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BrafP28028 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
BrafP28028 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
BrafP28028 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BrafP28028 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.31■□□□□ 0.36
BrafP28028 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BrafP28028 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BrafP28028 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BrafP28028 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.31■□□□□ 0.36
BrafP28028 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BrafP28028 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BrafP28028 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BrafP28028 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
BrafP28028 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BrafP28028 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
BrafP28028 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BrafP28028 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BrafP28028 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
BrafP28028 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BrafP28028 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.31■□□□□ 0.36
BrafP28028 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.31■□□□□ 0.36
BrafP28028 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
BrafP28028 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
BrafP28028 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BrafP28028 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BrafP28028 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BrafP28028 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.3■□□□□ 0.36
BrafP28028 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BrafP28028 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BrafP28028 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BrafP28028 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms