Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cd40lgP27548 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cd40lgP27548 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cd40lgP27548 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.37■□□□□ 0.21
Cd40lgP27548 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.37■□□□□ 0.21
Cd40lgP27548 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cd40lgP27548 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cd40lgP27548 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.37■□□□□ 0.21
Cd40lgP27548 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cd40lgP27548 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cd40lgP27548 Flg-201ENSMUST00000050758 1488 ntBASIC16.36■□□□□ 0.21
Cd40lgP27548 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cd40lgP27548 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Cd40lgP27548 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.36■□□□□ 0.21
Cd40lgP27548 Trmt13-210ENSMUST00000198454 880 ntBASIC16.36■□□□□ 0.21
Cd40lgP27548 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.36■□□□□ 0.21
Cd40lgP27548 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cd40lgP27548 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cd40lgP27548 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cd40lgP27548 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cd40lgP27548 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cd40lgP27548 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Cd40lgP27548 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cd40lgP27548 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cd40lgP27548 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cd40lgP27548 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cd40lgP27548 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Cd40lgP27548 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cd40lgP27548 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cd40lgP27548 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cd40lgP27548 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cd40lgP27548 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cd40lgP27548 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cd40lgP27548 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.35■□□□□ 0.21
Cd40lgP27548 Gm27011-201ENSMUST00000182352 972 ntBASIC16.35■□□□□ 0.21
Cd40lgP27548 Gm8520-201ENSMUST00000186517 868 ntBASIC16.35■□□□□ 0.21
Cd40lgP27548 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.35■□□□□ 0.21
Cd40lgP27548 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Cd40lgP27548 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cd40lgP27548 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.35■□□□□ 0.21
Cd40lgP27548 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Cd40lgP27548 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cd40lgP27548 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.35■□□□□ 0.21
Cd40lgP27548 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cd40lgP27548 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cd40lgP27548 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cd40lgP27548 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Cd40lgP27548 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cd40lgP27548 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cd40lgP27548 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cd40lgP27548 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cd40lgP27548 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.34■□□□□ 0.21
Cd40lgP27548 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cd40lgP27548 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.34■□□□□ 0.21
Cd40lgP27548 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cd40lgP27548 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.34■□□□□ 0.21
Cd40lgP27548 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.34■□□□□ 0.21
Cd40lgP27548 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cd40lgP27548 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cd40lgP27548 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cd40lgP27548 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cd40lgP27548 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cd40lgP27548 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cd40lgP27548 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cd40lgP27548 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Cd40lgP27548 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cd40lgP27548 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cd40lgP27548 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cd40lgP27548 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cd40lgP27548 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Cd40lgP27548 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Cd40lgP27548 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.33■□□□□ 0.2
Cd40lgP27548 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cd40lgP27548 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cd40lgP27548 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cd40lgP27548 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cd40lgP27548 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cd40lgP27548 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cd40lgP27548 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cd40lgP27548 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cd40lgP27548 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd40lgP27548 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cd40lgP27548 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd40lgP27548 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd40lgP27548 Gm12527-201ENSMUST00000117967 564 ntBASIC16.32■□□□□ 0.2
Cd40lgP27548 BC021767-201ENSMUST00000126387 1716 ntBASIC16.32■□□□□ 0.2
Cd40lgP27548 Gm10653-202ENSMUST00000139570 835 ntBASIC16.32■□□□□ 0.2
Cd40lgP27548 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Cd40lgP27548 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.32■□□□□ 0.2
Cd40lgP27548 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cd40lgP27548 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd40lgP27548 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.32■□□□□ 0.2
Cd40lgP27548 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd40lgP27548 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cd40lgP27548 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd40lgP27548 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.32■□□□□ 0.2
Cd40lgP27548 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd40lgP27548 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cd40lgP27548 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd40lgP27548 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms