Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pde6bP23440 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pde6bP23440 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pde6bP23440 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Pde6bP23440 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pde6bP23440 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pde6bP23440 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Pde6bP23440 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pde6bP23440 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Pde6bP23440 Grk6-206ENSMUST00000224995 2971 ntBASIC19.32■□□□□ 0.68
Pde6bP23440 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pde6bP23440 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pde6bP23440 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pde6bP23440 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pde6bP23440 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pde6bP23440 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pde6bP23440 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pde6bP23440 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pde6bP23440 Gm13559-201ENSMUST00000120476 863 ntBASIC19.32■□□□□ 0.68
Pde6bP23440 Gm3375-201ENSMUST00000203929 796 ntBASIC19.32■□□□□ 0.68
Pde6bP23440 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Pde6bP23440 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Pde6bP23440 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pde6bP23440 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pde6bP23440 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pde6bP23440 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pde6bP23440 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pde6bP23440 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pde6bP23440 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pde6bP23440 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Pde6bP23440 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pde6bP23440 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pde6bP23440 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pde6bP23440 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.31■□□□□ 0.68
Pde6bP23440 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pde6bP23440 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pde6bP23440 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pde6bP23440 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pde6bP23440 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Pde6bP23440 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pde6bP23440 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pde6bP23440 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pde6bP23440 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pde6bP23440 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pde6bP23440 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Pde6bP23440 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.3■□□□□ 0.68
Pde6bP23440 Gm11539-201ENSMUST00000119837 557 ntBASIC19.3■□□□□ 0.68
Pde6bP23440 Gm13436-201ENSMUST00000120418 567 ntBASIC19.3■□□□□ 0.68
Pde6bP23440 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pde6bP23440 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.3■□□□□ 0.68
Pde6bP23440 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pde6bP23440 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.3■□□□□ 0.68
Pde6bP23440 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
Pde6bP23440 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pde6bP23440 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pde6bP23440 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pde6bP23440 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pde6bP23440 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pde6bP23440 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pde6bP23440 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pde6bP23440 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pde6bP23440 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pde6bP23440 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pde6bP23440 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pde6bP23440 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Pde6bP23440 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.29■□□□□ 0.68
Pde6bP23440 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.29■□□□□ 0.68
Pde6bP23440 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pde6bP23440 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.29■□□□□ 0.68
Pde6bP23440 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pde6bP23440 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pde6bP23440 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pde6bP23440 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pde6bP23440 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pde6bP23440 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.29■□□□□ 0.68
Pde6bP23440 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.29■□□□□ 0.68
Pde6bP23440 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6bP23440 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6bP23440 BC021767-201ENSMUST00000126387 1716 ntBASIC19.28■□□□□ 0.68
Pde6bP23440 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6bP23440 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6bP23440 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6bP23440 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6bP23440 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6bP23440 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6bP23440 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.28■□□□□ 0.68
Pde6bP23440 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6bP23440 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6bP23440 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6bP23440 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.28■□□□□ 0.68
Pde6bP23440 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6bP23440 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.28■□□□□ 0.68
Pde6bP23440 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6bP23440 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pde6bP23440 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pde6bP23440 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pde6bP23440 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pde6bP23440 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Pde6bP23440 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
Pde6bP23440 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms