Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx1P18111 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx1P18111 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx1P18111 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx1P18111 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx1P18111 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx1P18111 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx1P18111 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx1P18111 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx1P18111 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.33□□□□□ -0.12
Cdx1P18111 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Cdx1P18111 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx1P18111 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx1P18111 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx1P18111 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx1P18111 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx1P18111 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx1P18111 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx1P18111 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx1P18111 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx1P18111 Mir6236-201ENSMUST00000184437 123 ntBASIC14.32□□□□□ -0.12
Cdx1P18111 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.32□□□□□ -0.12
Cdx1P18111 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx1P18111 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx1P18111 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx1P18111 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx1P18111 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cdx1P18111 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx1P18111 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx1P18111 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cdx1P18111 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx1P18111 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx1P18111 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx1P18111 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx1P18111 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx1P18111 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.32□□□□□ -0.12
Cdx1P18111 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.32□□□□□ -0.12
Cdx1P18111 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx1P18111 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx1P18111 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx1P18111 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx1P18111 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx1P18111 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.31□□□□□ -0.12
Cdx1P18111 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx1P18111 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC14.31□□□□□ -0.12
Cdx1P18111 Gm8969-201ENSMUST00000199694 526 ntBASIC14.31□□□□□ -0.12
Cdx1P18111 AV356131-201ENSMUST00000206201 750 ntBASIC14.31□□□□□ -0.12
Cdx1P18111 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx1P18111 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx1P18111 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx1P18111 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx1P18111 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx1P18111 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx1P18111 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx1P18111 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.3□□□□□ -0.12
Cdx1P18111 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Cdx1P18111 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx1P18111 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx1P18111 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx1P18111 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx1P18111 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx1P18111 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.3□□□□□ -0.12
Cdx1P18111 Gm10033-202ENSMUST00000211874 928 ntBASIC14.3□□□□□ -0.12
Cdx1P18111 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cdx1P18111 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx1P18111 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx1P18111 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx1P18111 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx1P18111 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx1P18111 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx1P18111 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx1P18111 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx1P18111 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx1P18111 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.29□□□□□ -0.12
Cdx1P18111 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx1P18111 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx1P18111 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx1P18111 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx1P18111 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx1P18111 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.29□□□□□ -0.12
Cdx1P18111 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.29□□□□□ -0.12
Cdx1P18111 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cdx1P18111 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx1P18111 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx1P18111 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx1P18111 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx1P18111 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx1P18111 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx1P18111 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.29□□□□□ -0.12
Cdx1P18111 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx1P18111 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx1P18111 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx1P18111 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdx1P18111 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cdx1P18111 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdx1P18111 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Cdx1P18111 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdx1P18111 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.28□□□□□ -0.12
Cdx1P18111 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdx1P18111 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms