Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd44P15379 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd44P15379 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd44P15379 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd44P15379 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd44P15379 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.66■□□□□ 0.58
Cd44P15379 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd44P15379 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd44P15379 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
Cd44P15379 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd44P15379 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd44P15379 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cd44P15379 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd44P15379 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cd44P15379 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.65■□□□□ 0.58
Cd44P15379 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cd44P15379 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd44P15379 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd44P15379 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd44P15379 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.65■□□□□ 0.58
Cd44P15379 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cd44P15379 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd44P15379 Gm7291-201ENSMUST00000199147 382 ntBASIC18.65■□□□□ 0.58
Cd44P15379 Gm18671-201ENSMUST00000214826 683 ntBASIC18.65■□□□□ 0.58
Cd44P15379 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.65■□□□□ 0.58
Cd44P15379 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd44P15379 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd44P15379 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd44P15379 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd44P15379 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cd44P15379 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd44P15379 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd44P15379 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Cd44P15379 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cd44P15379 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.64■□□□□ 0.58
Cd44P15379 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.64■□□□□ 0.58
Cd44P15379 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cd44P15379 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cd44P15379 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cd44P15379 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Cd44P15379 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd44P15379 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.64■□□□□ 0.57
Cd44P15379 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.64■□□□□ 0.57
Cd44P15379 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.64■□□□□ 0.57
Cd44P15379 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd44P15379 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.64■□□□□ 0.57
Cd44P15379 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cd44P15379 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd44P15379 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cd44P15379 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd44P15379 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd44P15379 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd44P15379 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd44P15379 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd44P15379 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd44P15379 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.63■□□□□ 0.57
Cd44P15379 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.63■□□□□ 0.57
Cd44P15379 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd44P15379 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd44P15379 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd44P15379 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Cd44P15379 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Cd44P15379 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cd44P15379 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cd44P15379 AV356131-201ENSMUST00000206201 750 ntBASIC18.63■□□□□ 0.57
Cd44P15379 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd44P15379 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Cd44P15379 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd44P15379 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cd44P15379 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd44P15379 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.63■□□□□ 0.57
Cd44P15379 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd44P15379 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cd44P15379 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd44P15379 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.62■□□□□ 0.57
Cd44P15379 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.62■□□□□ 0.57
Cd44P15379 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cd44P15379 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.62■□□□□ 0.57
Cd44P15379 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.62■□□□□ 0.57
Cd44P15379 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cd44P15379 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.62■□□□□ 0.57
Cd44P15379 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.62■□□□□ 0.57
Cd44P15379 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd44P15379 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd44P15379 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Cd44P15379 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd44P15379 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cd44P15379 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd44P15379 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.61■□□□□ 0.57
Cd44P15379 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Cd44P15379 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd44P15379 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd44P15379 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.61■□□□□ 0.57
Cd44P15379 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.61■□□□□ 0.57
Cd44P15379 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd44P15379 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd44P15379 Gm6365-201ENSMUST00000054711 744 ntBASIC18.61■□□□□ 0.57
Cd44P15379 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.61■□□□□ 0.57
Cd44P15379 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cd44P15379 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms