Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Ccl3P10855 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ccl3P10855 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ccl3P10855 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccl3P10855 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.71■□□□□ 0.11
Ccl3P10855 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccl3P10855 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccl3P10855 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ccl3P10855 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccl3P10855 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccl3P10855 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ccl3P10855 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccl3P10855 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccl3P10855 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
Ccl3P10855 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Ccl3P10855 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccl3P10855 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ccl3P10855 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ccl3P10855 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.7■□□□□ 0.1
Ccl3P10855 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccl3P10855 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccl3P10855 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ccl3P10855 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccl3P10855 Gm7284-201ENSMUST00000131667 944 ntBASIC15.7■□□□□ 0.1
Ccl3P10855 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccl3P10855 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccl3P10855 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.7■□□□□ 0.1
Ccl3P10855 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccl3P10855 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccl3P10855 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ccl3P10855 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccl3P10855 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ccl3P10855 Tgds-204ENSMUST00000228543 1594 ntBASIC15.7■□□□□ 0.1
Ccl3P10855 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccl3P10855 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Ccl3P10855 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.69■□□□□ 0.1
Ccl3P10855 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ccl3P10855 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccl3P10855 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccl3P10855 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccl3P10855 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccl3P10855 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ccl3P10855 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccl3P10855 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccl3P10855 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccl3P10855 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccl3P10855 Gm17661-201ENSMUST00000170317 270 ntBASIC15.69■□□□□ 0.1
Ccl3P10855 Gm29791-202ENSMUST00000207888 369 ntBASIC15.69■□□□□ 0.1
Ccl3P10855 Gm7370-201ENSMUST00000219471 767 ntBASIC15.69■□□□□ 0.1
Ccl3P10855 Gm21559-201ENSMUST00000220638 855 ntBASIC15.69■□□□□ 0.1
Ccl3P10855 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ccl3P10855 Gm8587-201ENSMUST00000076538 843 ntBASIC15.69■□□□□ 0.1
Ccl3P10855 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccl3P10855 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccl3P10855 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Ccl3P10855 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ccl3P10855 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccl3P10855 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccl3P10855 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccl3P10855 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccl3P10855 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccl3P10855 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccl3P10855 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccl3P10855 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccl3P10855 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.68■□□□□ 0.1
Ccl3P10855 Gm27389-201ENSMUST00000183622 195 ntBASIC15.68■□□□□ 0.1
Ccl3P10855 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.68■□□□□ 0.1
Ccl3P10855 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccl3P10855 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccl3P10855 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ccl3P10855 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccl3P10855 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccl3P10855 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccl3P10855 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl3P10855 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl3P10855 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ccl3P10855 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl3P10855 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl3P10855 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.67■□□□□ 0.1
Ccl3P10855 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl3P10855 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl3P10855 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl3P10855 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl3P10855 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl3P10855 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl3P10855 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl3P10855 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ccl3P10855 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Ccl3P10855 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl3P10855 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl3P10855 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl3P10855 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl3P10855 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.66■□□□□ 0.1
Ccl3P10855 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.66■□□□□ 0.1
Ccl3P10855 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccl3P10855 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccl3P10855 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccl3P10855 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.66■□□□□ 0.1
Ccl3P10855 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
Ccl3P10855 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms