Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxa3P02831 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxa3P02831 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxa3P02831 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxa3P02831 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxa3P02831 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Hoxa3P02831 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxa3P02831 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxa3P02831 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.88□□□□□ -0.03
Hoxa3P02831 Gm715-201ENSMUST00000117865 831 ntBASIC14.88□□□□□ -0.03
Hoxa3P02831 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.88□□□□□ -0.03
Hoxa3P02831 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.88□□□□□ -0.03
Hoxa3P02831 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxa3P02831 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.88□□□□□ -0.03
Hoxa3P02831 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxa3P02831 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.88□□□□□ -0.03
Hoxa3P02831 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxa3P02831 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxa3P02831 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxa3P02831 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxa3P02831 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxa3P02831 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxa3P02831 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Hoxa3P02831 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.88□□□□□ -0.03
Hoxa3P02831 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Hoxa3P02831 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxa3P02831 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Hoxa3P02831 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxa3P02831 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxa3P02831 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxa3P02831 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxa3P02831 Gm38285-201ENSMUST00000192928 922 ntBASIC14.87□□□□□ -0.03
Hoxa3P02831 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxa3P02831 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxa3P02831 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.87□□□□□ -0.03
Hoxa3P02831 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxa3P02831 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxa3P02831 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxa3P02831 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.86□□□□□ -0.03
Hoxa3P02831 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxa3P02831 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxa3P02831 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxa3P02831 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxa3P02831 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxa3P02831 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxa3P02831 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxa3P02831 Mir1199-201ENSMUST00000117015 119 ntBASIC14.86□□□□□ -0.03
Hoxa3P02831 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.86□□□□□ -0.03
Hoxa3P02831 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.86□□□□□ -0.03
Hoxa3P02831 Mir7071-201ENSMUST00000184847 69 ntBASIC14.86□□□□□ -0.03
Hoxa3P02831 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.86□□□□□ -0.03
Hoxa3P02831 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxa3P02831 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxa3P02831 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.86□□□□□ -0.03
Hoxa3P02831 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxa3P02831 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.86□□□□□ -0.03
Hoxa3P02831 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxa3P02831 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa3P02831 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa3P02831 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.85□□□□□ -0.03
Hoxa3P02831 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa3P02831 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa3P02831 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa3P02831 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Hoxa3P02831 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa3P02831 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa3P02831 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa3P02831 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa3P02831 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa3P02831 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa3P02831 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa3P02831 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.85□□□□□ -0.03
Hoxa3P02831 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.85□□□□□ -0.03
Hoxa3P02831 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa3P02831 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Hoxa3P02831 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa3P02831 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa3P02831 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa3P02831 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.85□□□□□ -0.03
Hoxa3P02831 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa3P02831 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Hoxa3P02831 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Hoxa3P02831 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa3P02831 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa3P02831 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa3P02831 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.84□□□□□ -0.03
Hoxa3P02831 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa3P02831 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa3P02831 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa3P02831 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa3P02831 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa3P02831 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Hoxa3P02831 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa3P02831 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa3P02831 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.84□□□□□ -0.03
Hoxa3P02831 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa3P02831 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa3P02831 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.84□□□□□ -0.03
Hoxa3P02831 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa3P02831 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms