Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
TcraP01849 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TcraP01849 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TcraP01849 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
TcraP01849 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TcraP01849 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TcraP01849 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TcraP01849 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TcraP01849 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TcraP01849 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TcraP01849 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.98□□□□□ -0.33
TcraP01849 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TcraP01849 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.98□□□□□ -0.33
TcraP01849 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TcraP01849 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TcraP01849 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
TcraP01849 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TcraP01849 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TcraP01849 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TcraP01849 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
TcraP01849 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC12.98□□□□□ -0.33
TcraP01849 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TcraP01849 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TcraP01849 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TcraP01849 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.98□□□□□ -0.33
TcraP01849 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TcraP01849 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TcraP01849 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.98□□□□□ -0.33
TcraP01849 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TcraP01849 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TcraP01849 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
TcraP01849 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TcraP01849 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC12.97□□□□□ -0.33
TcraP01849 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TcraP01849 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TcraP01849 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TcraP01849 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TcraP01849 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TcraP01849 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TcraP01849 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TcraP01849 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TcraP01849 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TcraP01849 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TcraP01849 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TcraP01849 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC12.97□□□□□ -0.33
TcraP01849 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TcraP01849 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC12.97□□□□□ -0.33
TcraP01849 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC12.97□□□□□ -0.33
TcraP01849 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.97□□□□□ -0.33
TcraP01849 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TcraP01849 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TcraP01849 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TcraP01849 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TcraP01849 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TcraP01849 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TcraP01849 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TcraP01849 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TcraP01849 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TcraP01849 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TcraP01849 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TcraP01849 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TcraP01849 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TcraP01849 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
TcraP01849 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
TcraP01849 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TcraP01849 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TcraP01849 Gm8969-201ENSMUST00000199694 526 ntBASIC12.96□□□□□ -0.33
TcraP01849 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
TcraP01849 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TcraP01849 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TcraP01849 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
TcraP01849 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TcraP01849 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TcraP01849 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
TcraP01849 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.96□□□□□ -0.34
TcraP01849 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TcraP01849 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.96□□□□□ -0.34
TcraP01849 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TcraP01849 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
TcraP01849 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TcraP01849 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TcraP01849 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TcraP01849 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TcraP01849 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TcraP01849 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TcraP01849 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TcraP01849 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TcraP01849 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TcraP01849 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TcraP01849 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
TcraP01849 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TcraP01849 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC12.95□□□□□ -0.34
TcraP01849 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TcraP01849 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TcraP01849 AC140930.3-201ENSMUST00000222935 274 ntBASIC12.95□□□□□ -0.34
TcraP01849 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
TcraP01849 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TcraP01849 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TcraP01849 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TcraP01849 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms