Protein–RNA interactions for Protein: P01808

Ig heavy chain V region T601, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01808 Gm29791-202ENSMUST00000207888 369 ntBASIC16.09■□□□□ 0.17
P01808 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P01808 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
P01808 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P01808 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
P01808 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
P01808 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.09■□□□□ 0.17
P01808 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
P01808 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
P01808 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
P01808 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
P01808 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
P01808 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
P01808 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
P01808 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
P01808 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
P01808 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.08■□□□□ 0.16
P01808 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
P01808 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
P01808 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
P01808 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.08■□□□□ 0.16
P01808 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
P01808 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
P01808 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
P01808 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
P01808 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
P01808 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P01808 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
P01808 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P01808 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P01808 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
P01808 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
P01808 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
P01808 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
P01808 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.07■□□□□ 0.16
P01808 Gm13168-201ENSMUST00000121771 632 ntBASIC16.07■□□□□ 0.16
P01808 Gm42545-201ENSMUST00000202755 922 ntBASIC16.07■□□□□ 0.16
P01808 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
P01808 Gm18025-201ENSMUST00000221733 862 ntBASIC16.07■□□□□ 0.16
P01808 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P01808 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P01808 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.07■□□□□ 0.16
P01808 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P01808 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
P01808 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P01808 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P01808 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
P01808 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.07■□□□□ 0.16
P01808 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
P01808 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P01808 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
P01808 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.06■□□□□ 0.16
P01808 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
P01808 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
P01808 Gm13401-201ENSMUST00000117074 291 ntBASIC16.06■□□□□ 0.16
P01808 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.06■□□□□ 0.16
P01808 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
P01808 Gm10698-201ENSMUST00000182663 604 ntBASIC16.06■□□□□ 0.16
P01808 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.06■□□□□ 0.16
P01808 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.06■□□□□ 0.16
P01808 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
P01808 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
P01808 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
P01808 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
P01808 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
P01808 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
P01808 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
P01808 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
P01808 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
P01808 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
P01808 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
P01808 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
P01808 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
P01808 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
P01808 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
P01808 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.05■□□□□ 0.16
P01808 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.05■□□□□ 0.16
P01808 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
P01808 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
P01808 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
P01808 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
P01808 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
P01808 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
P01808 Gm10418-201ENSMUST00000100943 576 ntBASIC16.04■□□□□ 0.16
P01808 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.04■□□□□ 0.16
P01808 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
P01808 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.04■□□□□ 0.16
P01808 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
P01808 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
P01808 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
P01808 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
P01808 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
P01808 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
P01808 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
P01808 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.03■□□□□ 0.16
P01808 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
P01808 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
P01808 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
P01808 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
P01808 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms