Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.16■□□□□ 0.66
Vti1aO89116 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Vti1aO89116 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vti1aO89116 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vti1aO89116 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vti1aO89116 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vti1aO89116 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.16■□□□□ 0.66
Vti1aO89116 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Vti1aO89116 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vti1aO89116 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vti1aO89116 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vti1aO89116 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vti1aO89116 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vti1aO89116 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vti1aO89116 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vti1aO89116 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Vti1aO89116 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Vti1aO89116 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vti1aO89116 Gm42545-201ENSMUST00000202755 922 ntBASIC19.15■□□□□ 0.66
Vti1aO89116 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vti1aO89116 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vti1aO89116 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vti1aO89116 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vti1aO89116 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vti1aO89116 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Vti1aO89116 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vti1aO89116 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vti1aO89116 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vti1aO89116 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vti1aO89116 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Vti1aO89116 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.14■□□□□ 0.66
Vti1aO89116 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Vti1aO89116 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vti1aO89116 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vti1aO89116 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vti1aO89116 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Vti1aO89116 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vti1aO89116 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vti1aO89116 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vti1aO89116 Gm43799-201ENSMUST00000201845 579 ntBASIC19.14■□□□□ 0.65
Vti1aO89116 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vti1aO89116 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vti1aO89116 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Vti1aO89116 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vti1aO89116 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vti1aO89116 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vti1aO89116 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vti1aO89116 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vti1aO89116 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.14■□□□□ 0.65
Vti1aO89116 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.14■□□□□ 0.65
Vti1aO89116 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vti1aO89116 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vti1aO89116 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vti1aO89116 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vti1aO89116 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Vti1aO89116 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vti1aO89116 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.13■□□□□ 0.65
Vti1aO89116 Gm15375-201ENSMUST00000119510 849 ntBASIC19.13■□□□□ 0.65
Vti1aO89116 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Vti1aO89116 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Vti1aO89116 Gm18025-201ENSMUST00000221733 862 ntBASIC19.13■□□□□ 0.65
Vti1aO89116 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vti1aO89116 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vti1aO89116 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vti1aO89116 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vti1aO89116 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Vti1aO89116 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.13■□□□□ 0.65
Vti1aO89116 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vti1aO89116 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vti1aO89116 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vti1aO89116 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.12■□□□□ 0.65
Vti1aO89116 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vti1aO89116 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vti1aO89116 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vti1aO89116 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Vti1aO89116 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Vti1aO89116 Gm6433-201ENSMUST00000118634 875 ntBASIC19.12■□□□□ 0.65
Vti1aO89116 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Vti1aO89116 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.12■□□□□ 0.65
Vti1aO89116 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.12■□□□□ 0.65
Vti1aO89116 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vti1aO89116 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Vti1aO89116 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vti1aO89116 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vti1aO89116 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.12■□□□□ 0.65
Vti1aO89116 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Vti1aO89116 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Vti1aO89116 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Vti1aO89116 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vti1aO89116 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vti1aO89116 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.11■□□□□ 0.65
Vti1aO89116 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vti1aO89116 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vti1aO89116 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vti1aO89116 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Vti1aO89116 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vti1aO89116 Gm30025-201ENSMUST00000218555 728 ntBASIC19.11■□□□□ 0.65
Vti1aO89116 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vti1aO89116 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vti1aO89116 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms