Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CopeO89079 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.36■□□□□ 0.53
CopeO89079 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CopeO89079 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CopeO89079 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CopeO89079 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CopeO89079 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CopeO89079 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CopeO89079 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CopeO89079 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CopeO89079 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CopeO89079 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CopeO89079 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CopeO89079 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CopeO89079 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CopeO89079 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CopeO89079 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CopeO89079 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CopeO89079 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CopeO89079 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CopeO89079 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CopeO89079 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CopeO89079 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CopeO89079 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
CopeO89079 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.34■□□□□ 0.53
CopeO89079 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CopeO89079 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CopeO89079 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CopeO89079 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CopeO89079 Idnk-204ENSMUST00000226010 1898 ntBASIC18.34■□□□□ 0.53
CopeO89079 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CopeO89079 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.34■□□□□ 0.53
CopeO89079 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CopeO89079 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CopeO89079 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CopeO89079 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CopeO89079 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CopeO89079 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
CopeO89079 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CopeO89079 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CopeO89079 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CopeO89079 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CopeO89079 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CopeO89079 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CopeO89079 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CopeO89079 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CopeO89079 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CopeO89079 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CopeO89079 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CopeO89079 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.33■□□□□ 0.52
CopeO89079 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CopeO89079 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.33■□□□□ 0.52
CopeO89079 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CopeO89079 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CopeO89079 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CopeO89079 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CopeO89079 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CopeO89079 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CopeO89079 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.32■□□□□ 0.52
CopeO89079 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CopeO89079 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CopeO89079 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CopeO89079 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CopeO89079 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CopeO89079 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CopeO89079 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CopeO89079 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.32■□□□□ 0.52
CopeO89079 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.32■□□□□ 0.52
CopeO89079 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CopeO89079 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CopeO89079 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CopeO89079 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CopeO89079 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CopeO89079 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CopeO89079 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CopeO89079 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CopeO89079 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CopeO89079 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CopeO89079 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CopeO89079 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CopeO89079 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CopeO89079 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.31■□□□□ 0.52
CopeO89079 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.31■□□□□ 0.52
CopeO89079 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CopeO89079 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CopeO89079 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CopeO89079 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CopeO89079 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CopeO89079 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CopeO89079 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CopeO89079 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CopeO89079 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CopeO89079 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CopeO89079 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.3■□□□□ 0.52
CopeO89079 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CopeO89079 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CopeO89079 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CopeO89079 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CopeO89079 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CopeO89079 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms