Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Syn1O88935 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Syn1O88935 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Syn1O88935 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Syn1O88935 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.26■□□□□ 0.51
Syn1O88935 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.26■□□□□ 0.51
Syn1O88935 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Syn1O88935 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Syn1O88935 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Syn1O88935 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Syn1O88935 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Syn1O88935 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Syn1O88935 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Syn1O88935 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Syn1O88935 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Syn1O88935 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Syn1O88935 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Syn1O88935 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Syn1O88935 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Syn1O88935 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.25■□□□□ 0.51
Syn1O88935 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Syn1O88935 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Syn1O88935 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.25■□□□□ 0.51
Syn1O88935 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Syn1O88935 Gm5864-201ENSMUST00000202263 970 ntBASIC18.25■□□□□ 0.51
Syn1O88935 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Syn1O88935 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Syn1O88935 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.25■□□□□ 0.51
Syn1O88935 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Syn1O88935 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Syn1O88935 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Syn1O88935 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Syn1O88935 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Syn1O88935 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.24■□□□□ 0.51
Syn1O88935 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Syn1O88935 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Syn1O88935 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.24■□□□□ 0.51
Syn1O88935 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Syn1O88935 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Syn1O88935 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Syn1O88935 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Syn1O88935 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Syn1O88935 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Syn1O88935 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Syn1O88935 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Syn1O88935 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.23■□□□□ 0.51
Syn1O88935 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Syn1O88935 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Syn1O88935 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Syn1O88935 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Syn1O88935 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Syn1O88935 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Syn1O88935 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Syn1O88935 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Syn1O88935 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Syn1O88935 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Syn1O88935 Gm11950-201ENSMUST00000121615 838 ntBASIC18.23■□□□□ 0.51
Syn1O88935 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Syn1O88935 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Syn1O88935 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.23■□□□□ 0.51
Syn1O88935 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Syn1O88935 Gm27357-201ENSMUST00000183754 135 ntBASIC18.23■□□□□ 0.51
Syn1O88935 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Syn1O88935 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Syn1O88935 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Syn1O88935 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Syn1O88935 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Syn1O88935 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Syn1O88935 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Syn1O88935 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Syn1O88935 Mir1668-201ENSMUST00000184114 107 ntBASIC18.22■□□□□ 0.51
Syn1O88935 Gm34391-201ENSMUST00000203706 907 ntBASIC18.22■□□□□ 0.51
Syn1O88935 Gm7370-201ENSMUST00000219471 767 ntBASIC18.22■□□□□ 0.51
Syn1O88935 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Syn1O88935 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Syn1O88935 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Syn1O88935 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Syn1O88935 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Syn1O88935 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Syn1O88935 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Syn1O88935 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Syn1O88935 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Syn1O88935 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Syn1O88935 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Syn1O88935 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Syn1O88935 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Syn1O88935 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Syn1O88935 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.21■□□□□ 0.51
Syn1O88935 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Syn1O88935 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Syn1O88935 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Syn1O88935 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.21■□□□□ 0.51
Syn1O88935 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.21■□□□□ 0.51
Syn1O88935 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.2■□□□□ 0.5
Syn1O88935 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Syn1O88935 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Syn1O88935 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Syn1O88935 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Syn1O88935 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Syn1O88935 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms