Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hcn1O88704 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hcn1O88704 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hcn1O88704 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.01■□□□□ 0.31
Hcn1O88704 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hcn1O88704 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.01■□□□□ 0.31
Hcn1O88704 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hcn1O88704 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hcn1O88704 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hcn1O88704 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Hcn1O88704 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hcn1O88704 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hcn1O88704 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hcn1O88704 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hcn1O88704 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.01■□□□□ 0.31
Hcn1O88704 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hcn1O88704 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hcn1O88704 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17■□□□□ 0.31
Hcn1O88704 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Hcn1O88704 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Hcn1O88704 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Hcn1O88704 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Hcn1O88704 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17■□□□□ 0.31
Hcn1O88704 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17■□□□□ 0.31
Hcn1O88704 Gm12669-201ENSMUST00000122162 1009 ntBASIC17■□□□□ 0.31
Hcn1O88704 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17■□□□□ 0.31
Hcn1O88704 Spcs1-207ENSMUST00000228767 1008 ntBASIC17■□□□□ 0.31
Hcn1O88704 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hcn1O88704 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17■□□□□ 0.31
Hcn1O88704 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Hcn1O88704 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17■□□□□ 0.31
Hcn1O88704 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Hcn1O88704 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17■□□□□ 0.31
Hcn1O88704 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Hcn1O88704 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hcn1O88704 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hcn1O88704 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Hcn1O88704 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hcn1O88704 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.99■□□□□ 0.31
Hcn1O88704 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.99■□□□□ 0.31
Hcn1O88704 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.99■□□□□ 0.31
Hcn1O88704 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.99■□□□□ 0.31
Hcn1O88704 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hcn1O88704 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hcn1O88704 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Hcn1O88704 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hcn1O88704 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hcn1O88704 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hcn1O88704 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hcn1O88704 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hcn1O88704 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hcn1O88704 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hcn1O88704 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hcn1O88704 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Hcn1O88704 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hcn1O88704 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hcn1O88704 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hcn1O88704 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Hcn1O88704 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.98■□□□□ 0.31
Hcn1O88704 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hcn1O88704 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hcn1O88704 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Hcn1O88704 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.98■□□□□ 0.31
Hcn1O88704 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.98■□□□□ 0.31
Hcn1O88704 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.98■□□□□ 0.31
Hcn1O88704 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hcn1O88704 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hcn1O88704 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hcn1O88704 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hcn1O88704 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hcn1O88704 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.98■□□□□ 0.31
Hcn1O88704 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hcn1O88704 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hcn1O88704 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hcn1O88704 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hcn1O88704 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hcn1O88704 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.97■□□□□ 0.31
Hcn1O88704 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hcn1O88704 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hcn1O88704 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.97■□□□□ 0.31
Hcn1O88704 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hcn1O88704 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hcn1O88704 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Hcn1O88704 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hcn1O88704 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hcn1O88704 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hcn1O88704 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hcn1O88704 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hcn1O88704 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hcn1O88704 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hcn1O88704 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hcn1O88704 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.96■□□□□ 0.31
Hcn1O88704 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.96■□□□□ 0.31
Hcn1O88704 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hcn1O88704 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.96■□□□□ 0.31
Hcn1O88704 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.96■□□□□ 0.31
Hcn1O88704 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.96■□□□□ 0.31
Hcn1O88704 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hcn1O88704 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hcn1O88704 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 151 ms