Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.27■□□□□ 0.36
ClppO88696 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ClppO88696 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ClppO88696 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
ClppO88696 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ClppO88696 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ClppO88696 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
ClppO88696 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.27■□□□□ 0.35
ClppO88696 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
ClppO88696 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ClppO88696 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ClppO88696 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ClppO88696 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClppO88696 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClppO88696 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClppO88696 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ClppO88696 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClppO88696 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ClppO88696 Gm715-201ENSMUST00000117865 831 ntBASIC17.26■□□□□ 0.35
ClppO88696 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ClppO88696 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.26■□□□□ 0.35
ClppO88696 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClppO88696 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.26■□□□□ 0.35
ClppO88696 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.26■□□□□ 0.35
ClppO88696 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClppO88696 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ClppO88696 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ClppO88696 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClppO88696 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClppO88696 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ClppO88696 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClppO88696 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ClppO88696 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ClppO88696 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClppO88696 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClppO88696 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ClppO88696 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClppO88696 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClppO88696 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.25■□□□□ 0.35
ClppO88696 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.25■□□□□ 0.35
ClppO88696 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ClppO88696 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClppO88696 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ClppO88696 Zfp783-201ENSMUST00000095946 670 ntBASIC17.25■□□□□ 0.35
ClppO88696 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClppO88696 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClppO88696 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClppO88696 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClppO88696 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ClppO88696 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ClppO88696 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
ClppO88696 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClppO88696 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClppO88696 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClppO88696 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClppO88696 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClppO88696 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClppO88696 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClppO88696 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ClppO88696 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClppO88696 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClppO88696 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClppO88696 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClppO88696 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClppO88696 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClppO88696 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClppO88696 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClppO88696 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClppO88696 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClppO88696 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
ClppO88696 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
ClppO88696 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.23■□□□□ 0.35
ClppO88696 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClppO88696 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClppO88696 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.23■□□□□ 0.35
ClppO88696 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ClppO88696 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ClppO88696 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClppO88696 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ClppO88696 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClppO88696 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ClppO88696 Gm10138-203ENSMUST00000206952 366 ntBASIC17.22■□□□□ 0.35
ClppO88696 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ClppO88696 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.22■□□□□ 0.35
ClppO88696 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClppO88696 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClppO88696 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ClppO88696 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ClppO88696 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ClppO88696 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ClppO88696 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ClppO88696 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
ClppO88696 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ClppO88696 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ClppO88696 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ClppO88696 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ClppO88696 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ClppO88696 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.21■□□□□ 0.35
ClppO88696 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.21■□□□□ 0.35
ClppO88696 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms