Protein–RNA interactions for Protein: O88509

Dnmt3b, DNA (cytosine-5)-methyltransferase 3B, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3bO88509 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dnmt3bO88509 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dnmt3bO88509 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.15■□□□□ 0.34
Dnmt3bO88509 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dnmt3bO88509 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dnmt3bO88509 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Dnmt3bO88509 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Dnmt3bO88509 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dnmt3bO88509 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dnmt3bO88509 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dnmt3bO88509 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dnmt3bO88509 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.14■□□□□ 0.33
Dnmt3bO88509 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.14■□□□□ 0.33
Dnmt3bO88509 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dnmt3bO88509 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dnmt3bO88509 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dnmt3bO88509 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dnmt3bO88509 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Dnmt3bO88509 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Dnmt3bO88509 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dnmt3bO88509 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Dnmt3bO88509 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Dnmt3bO88509 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.13■□□□□ 0.33
Dnmt3bO88509 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dnmt3bO88509 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Dnmt3bO88509 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
Dnmt3bO88509 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dnmt3bO88509 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.13■□□□□ 0.33
Dnmt3bO88509 Gm7860-201ENSMUST00000121190 879 ntBASIC17.13■□□□□ 0.33
Dnmt3bO88509 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dnmt3bO88509 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.13■□□□□ 0.33
Dnmt3bO88509 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.13■□□□□ 0.33
Dnmt3bO88509 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dnmt3bO88509 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dnmt3bO88509 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnmt3bO88509 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Dnmt3bO88509 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnmt3bO88509 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Dnmt3bO88509 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnmt3bO88509 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Dnmt3bO88509 Gm13534-201ENSMUST00000121169 513 ntBASIC17.12■□□□□ 0.33
Dnmt3bO88509 Mir6982-201ENSMUST00000184354 68 ntBASIC17.12■□□□□ 0.33
Dnmt3bO88509 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnmt3bO88509 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Dnmt3bO88509 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnmt3bO88509 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnmt3bO88509 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Dnmt3bO88509 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Dnmt3bO88509 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnmt3bO88509 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Dnmt3bO88509 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnmt3bO88509 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnmt3bO88509 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Dnmt3bO88509 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnmt3bO88509 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
Dnmt3bO88509 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.11■□□□□ 0.33
Dnmt3bO88509 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnmt3bO88509 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Dnmt3bO88509 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnmt3bO88509 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.11■□□□□ 0.33
Dnmt3bO88509 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Dnmt3bO88509 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnmt3bO88509 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnmt3bO88509 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.11■□□□□ 0.33
Dnmt3bO88509 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.11■□□□□ 0.33
Dnmt3bO88509 Gm6211-202ENSMUST00000167849 925 ntBASIC17.11■□□□□ 0.33
Dnmt3bO88509 Gm37856-201ENSMUST00000191634 999 ntBASIC17.11■□□□□ 0.33
Dnmt3bO88509 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnmt3bO88509 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.11■□□□□ 0.33
Dnmt3bO88509 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnmt3bO88509 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnmt3bO88509 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Dnmt3bO88509 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Dnmt3bO88509 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnmt3bO88509 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.1■□□□□ 0.33
Dnmt3bO88509 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnmt3bO88509 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnmt3bO88509 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Dnmt3bO88509 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnmt3bO88509 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.1■□□□□ 0.33
Dnmt3bO88509 Trmt13-210ENSMUST00000198454 880 ntBASIC17.1■□□□□ 0.33
Dnmt3bO88509 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnmt3bO88509 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Dnmt3bO88509 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.1■□□□□ 0.33
Dnmt3bO88509 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnmt3bO88509 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnmt3bO88509 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Dnmt3bO88509 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Dnmt3bO88509 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnmt3bO88509 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Dnmt3bO88509 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dnmt3bO88509 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dnmt3bO88509 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dnmt3bO88509 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dnmt3bO88509 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dnmt3bO88509 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Dnmt3bO88509 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Dnmt3bO88509 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dnmt3bO88509 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.09■□□□□ 0.33
Dnmt3bO88509 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms