Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
Ubr1O70481 Gm35558-201ENSMUST00000222675 2219 ntBASIC23.18■■□□□ 1.3
Ubr1O70481 Gm9103-201ENSMUST00000119371 405 ntBASIC23.18■■□□□ 1.3
Ubr1O70481 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ubr1O70481 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ubr1O70481 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ubr1O70481 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Ubr1O70481 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC23.17■■□□□ 1.3
Ubr1O70481 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ubr1O70481 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Ubr1O70481 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ubr1O70481 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Ubr1O70481 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ubr1O70481 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ubr1O70481 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ubr1O70481 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Ubr1O70481 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ubr1O70481 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC23.17■■□□□ 1.3
Ubr1O70481 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ubr1O70481 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ubr1O70481 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ubr1O70481 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ubr1O70481 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC23.16■■□□□ 1.3
Ubr1O70481 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ubr1O70481 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Ubr1O70481 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ubr1O70481 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC23.16■■□□□ 1.3
Ubr1O70481 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ubr1O70481 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ubr1O70481 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
Ubr1O70481 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ubr1O70481 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ubr1O70481 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ubr1O70481 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ubr1O70481 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Ubr1O70481 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ubr1O70481 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ubr1O70481 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ubr1O70481 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ubr1O70481 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ubr1O70481 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ubr1O70481 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ubr1O70481 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Ubr1O70481 Gm18958-201ENSMUST00000174258 762 ntBASIC23.15■■□□□ 1.3
Ubr1O70481 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ubr1O70481 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ubr1O70481 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ubr1O70481 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Ubr1O70481 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ubr1O70481 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ubr1O70481 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ubr1O70481 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ubr1O70481 Gm7213-201ENSMUST00000215977 950 ntBASIC23.14■■□□□ 1.3
Ubr1O70481 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Ubr1O70481 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
Ubr1O70481 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
Ubr1O70481 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ubr1O70481 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ubr1O70481 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ubr1O70481 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Ubr1O70481 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ubr1O70481 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Ubr1O70481 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ubr1O70481 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC23.14■■□□□ 1.29
Ubr1O70481 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ubr1O70481 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ubr1O70481 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC23.14■■□□□ 1.29
Ubr1O70481 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Ubr1O70481 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC23.14■■□□□ 1.29
Ubr1O70481 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ubr1O70481 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ubr1O70481 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ubr1O70481 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ubr1O70481 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Ubr1O70481 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ubr1O70481 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Ubr1O70481 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ubr1O70481 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC23.13■■□□□ 1.29
Ubr1O70481 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC23.13■■□□□ 1.29
Ubr1O70481 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Ubr1O70481 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC23.13■■□□□ 1.29
Ubr1O70481 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ubr1O70481 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ubr1O70481 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ubr1O70481 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Ubr1O70481 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ubr1O70481 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ubr1O70481 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ubr1O70481 Gm21559-201ENSMUST00000220638 855 ntBASIC23.12■■□□□ 1.29
Ubr1O70481 Gm8587-201ENSMUST00000076538 843 ntBASIC23.12■■□□□ 1.29
Ubr1O70481 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ubr1O70481 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ubr1O70481 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC23.12■■□□□ 1.29
Ubr1O70481 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC23.12■■□□□ 1.29
Ubr1O70481 AC120002.2-201ENSMUST00000220205 773 ntBASIC23.12■■□□□ 1.29
Ubr1O70481 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ubr1O70481 Golph3-205ENSMUST00000228671 2842 ntBASIC23.12■■□□□ 1.29
Ubr1O70481 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ubr1O70481 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ubr1O70481 Gm6627-201ENSMUST00000218299 2386 ntBASIC23.11■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms