Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdlim1O70400 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.52■□□□□ 0.39
Pdlim1O70400 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pdlim1O70400 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.52■□□□□ 0.39
Pdlim1O70400 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pdlim1O70400 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim1O70400 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim1O70400 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim1O70400 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim1O70400 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.51■□□□□ 0.39
Pdlim1O70400 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim1O70400 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim1O70400 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim1O70400 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim1O70400 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Pdlim1O70400 Gm43183-201ENSMUST00000200632 547 ntBASIC17.51■□□□□ 0.39
Pdlim1O70400 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim1O70400 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim1O70400 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim1O70400 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim1O70400 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.51■□□□□ 0.39
Pdlim1O70400 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.51■□□□□ 0.39
Pdlim1O70400 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim1O70400 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pdlim1O70400 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim1O70400 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim1O70400 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim1O70400 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim1O70400 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim1O70400 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.5■□□□□ 0.39
Pdlim1O70400 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim1O70400 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim1O70400 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.5■□□□□ 0.39
Pdlim1O70400 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim1O70400 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Pdlim1O70400 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim1O70400 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim1O70400 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim1O70400 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim1O70400 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim1O70400 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim1O70400 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim1O70400 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim1O70400 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.49■□□□□ 0.39
Pdlim1O70400 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim1O70400 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.49■□□□□ 0.39
Pdlim1O70400 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.49■□□□□ 0.39
Pdlim1O70400 Gm12382-201ENSMUST00000122005 922 ntBASIC17.49■□□□□ 0.39
Pdlim1O70400 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Pdlim1O70400 Gm6576-201ENSMUST00000169678 883 ntBASIC17.49■□□□□ 0.39
Pdlim1O70400 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim1O70400 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim1O70400 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.49■□□□□ 0.39
Pdlim1O70400 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim1O70400 Grk6-206ENSMUST00000224995 2971 ntBASIC17.49■□□□□ 0.39
Pdlim1O70400 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim1O70400 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim1O70400 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim1O70400 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim1O70400 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim1O70400 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim1O70400 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim1O70400 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim1O70400 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim1O70400 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim1O70400 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.48■□□□□ 0.39
Pdlim1O70400 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim1O70400 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim1O70400 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.48■□□□□ 0.39
Pdlim1O70400 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Pdlim1O70400 Gm10812-201ENSMUST00000099864 546 ntBASIC17.48■□□□□ 0.39
Pdlim1O70400 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.48■□□□□ 0.39
Pdlim1O70400 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim1O70400 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.48■□□□□ 0.39
Pdlim1O70400 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim1O70400 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim1O70400 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim1O70400 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim1O70400 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim1O70400 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim1O70400 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim1O70400 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim1O70400 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Pdlim1O70400 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim1O70400 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim1O70400 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim1O70400 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim1O70400 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim1O70400 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim1O70400 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pdlim1O70400 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim1O70400 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.47■□□□□ 0.39
Pdlim1O70400 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim1O70400 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim1O70400 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Pdlim1O70400 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdlim1O70400 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.46■□□□□ 0.39
Pdlim1O70400 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdlim1O70400 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdlim1O70400 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms