Protein–RNA interactions for Protein: O55229

Chkb, Choline/ethanolamine kinase, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkbO55229 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ChkbO55229 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.93■□□□□ 0.62
ChkbO55229 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ChkbO55229 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ChkbO55229 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ChkbO55229 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
ChkbO55229 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ChkbO55229 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ChkbO55229 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ChkbO55229 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ChkbO55229 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ChkbO55229 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ChkbO55229 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ChkbO55229 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.92■□□□□ 0.62
ChkbO55229 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ChkbO55229 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ChkbO55229 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.92■□□□□ 0.62
ChkbO55229 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.92■□□□□ 0.62
ChkbO55229 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ChkbO55229 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ChkbO55229 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ChkbO55229 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ChkbO55229 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ChkbO55229 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ChkbO55229 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ChkbO55229 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ChkbO55229 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ChkbO55229 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ChkbO55229 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ChkbO55229 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ChkbO55229 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ChkbO55229 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ChkbO55229 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ChkbO55229 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ChkbO55229 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ChkbO55229 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ChkbO55229 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ChkbO55229 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ChkbO55229 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ChkbO55229 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.91■□□□□ 0.62
ChkbO55229 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.91■□□□□ 0.62
ChkbO55229 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.91■□□□□ 0.62
ChkbO55229 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ChkbO55229 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ChkbO55229 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ChkbO55229 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ChkbO55229 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ChkbO55229 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ChkbO55229 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ChkbO55229 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ChkbO55229 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ChkbO55229 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
ChkbO55229 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.9■□□□□ 0.62
ChkbO55229 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ChkbO55229 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.9■□□□□ 0.62
ChkbO55229 Gm29257-201ENSMUST00000186115 639 ntBASIC18.9■□□□□ 0.62
ChkbO55229 Gm37179-201ENSMUST00000194862 823 ntBASIC18.9■□□□□ 0.62
ChkbO55229 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ChkbO55229 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
ChkbO55229 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.9■□□□□ 0.62
ChkbO55229 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ChkbO55229 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
ChkbO55229 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ChkbO55229 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ChkbO55229 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ChkbO55229 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ChkbO55229 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
ChkbO55229 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ChkbO55229 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.89■□□□□ 0.61
ChkbO55229 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.89■□□□□ 0.61
ChkbO55229 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ChkbO55229 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ChkbO55229 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ChkbO55229 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ChkbO55229 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ChkbO55229 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ChkbO55229 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ChkbO55229 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ChkbO55229 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ChkbO55229 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
ChkbO55229 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ChkbO55229 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ChkbO55229 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ChkbO55229 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.88■□□□□ 0.61
ChkbO55229 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.88■□□□□ 0.61
ChkbO55229 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ChkbO55229 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ChkbO55229 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.88■□□□□ 0.61
ChkbO55229 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ChkbO55229 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ChkbO55229 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ChkbO55229 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ChkbO55229 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ChkbO55229 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ChkbO55229 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ChkbO55229 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
ChkbO55229 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ChkbO55229 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ChkbO55229 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ChkbO55229 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms