Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ldb2O55203 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ldb2O55203 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ldb2O55203 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ldb2O55203 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.66■□□□□ 0.42
Ldb2O55203 Gm15375-201ENSMUST00000119510 849 ntBASIC17.66■□□□□ 0.42
Ldb2O55203 Gm13158-201ENSMUST00000122007 736 ntBASIC17.66■□□□□ 0.42
Ldb2O55203 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.66■□□□□ 0.42
Ldb2O55203 Gm29791-202ENSMUST00000207888 369 ntBASIC17.66■□□□□ 0.42
Ldb2O55203 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ldb2O55203 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.66■□□□□ 0.42
Ldb2O55203 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ldb2O55203 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ldb2O55203 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.66■□□□□ 0.42
Ldb2O55203 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ldb2O55203 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ldb2O55203 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ldb2O55203 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ldb2O55203 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ldb2O55203 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ldb2O55203 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ldb2O55203 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.65■□□□□ 0.42
Ldb2O55203 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.65■□□□□ 0.42
Ldb2O55203 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ldb2O55203 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ldb2O55203 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.65■□□□□ 0.42
Ldb2O55203 Trmt13-210ENSMUST00000198454 880 ntBASIC17.65■□□□□ 0.42
Ldb2O55203 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ldb2O55203 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.65■□□□□ 0.42
Ldb2O55203 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ldb2O55203 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ldb2O55203 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ldb2O55203 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.64■□□□□ 0.42
Ldb2O55203 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ldb2O55203 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ldb2O55203 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ldb2O55203 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ldb2O55203 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ldb2O55203 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.64■□□□□ 0.41
Ldb2O55203 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.64■□□□□ 0.41
Ldb2O55203 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Ldb2O55203 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ldb2O55203 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ldb2O55203 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.63■□□□□ 0.41
Ldb2O55203 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ldb2O55203 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ldb2O55203 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ldb2O55203 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.63■□□□□ 0.41
Ldb2O55203 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ldb2O55203 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ldb2O55203 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ldb2O55203 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ldb2O55203 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.63■□□□□ 0.41
Ldb2O55203 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ldb2O55203 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.63■□□□□ 0.41
Ldb2O55203 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Ldb2O55203 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ldb2O55203 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ldb2O55203 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.63■□□□□ 0.41
Ldb2O55203 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ldb2O55203 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ldb2O55203 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ldb2O55203 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ldb2O55203 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ldb2O55203 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ldb2O55203 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.63■□□□□ 0.41
Ldb2O55203 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ldb2O55203 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ldb2O55203 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
Ldb2O55203 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ldb2O55203 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ldb2O55203 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ldb2O55203 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ldb2O55203 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ldb2O55203 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Ldb2O55203 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ldb2O55203 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ldb2O55203 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.62■□□□□ 0.41
Ldb2O55203 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ldb2O55203 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Ldb2O55203 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ldb2O55203 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ldb2O55203 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ldb2O55203 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ldb2O55203 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ldb2O55203 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ldb2O55203 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.62■□□□□ 0.41
Ldb2O55203 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ldb2O55203 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.62■□□□□ 0.41
Ldb2O55203 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ldb2O55203 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ldb2O55203 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ldb2O55203 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ldb2O55203 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ldb2O55203 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ldb2O55203 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ldb2O55203 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ldb2O55203 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ldb2O55203 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.61■□□□□ 0.41
Ldb2O55203 Gm10418-201ENSMUST00000100943 576 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms