Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarce1O54941 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smarce1O54941 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarce1O54941 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.12■□□□□ 0.97
Smarce1O54941 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarce1O54941 Gm42642-201ENSMUST00000200683 355 ntBASIC21.12■□□□□ 0.97
Smarce1O54941 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.12■□□□□ 0.97
Smarce1O54941 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.12■□□□□ 0.97
Smarce1O54941 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.12■□□□□ 0.97
Smarce1O54941 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Smarce1O54941 Gm6598-201ENSMUST00000202719 2615 ntBASIC21.12■□□□□ 0.97
Smarce1O54941 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarce1O54941 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarce1O54941 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarce1O54941 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarce1O54941 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarce1O54941 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.11■□□□□ 0.97
Smarce1O54941 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarce1O54941 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarce1O54941 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarce1O54941 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC21.11■□□□□ 0.97
Smarce1O54941 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarce1O54941 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.11■□□□□ 0.97
Smarce1O54941 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.11■□□□□ 0.97
Smarce1O54941 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.11■□□□□ 0.97
Smarce1O54941 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarce1O54941 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC21.11■□□□□ 0.97
Smarce1O54941 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarce1O54941 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarce1O54941 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.1■□□□□ 0.97
Smarce1O54941 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smarce1O54941 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC21.1■□□□□ 0.97
Smarce1O54941 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smarce1O54941 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Smarce1O54941 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Smarce1O54941 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smarce1O54941 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Smarce1O54941 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.1■□□□□ 0.97
Smarce1O54941 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.1■□□□□ 0.97
Smarce1O54941 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smarce1O54941 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Smarce1O54941 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smarce1O54941 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smarce1O54941 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarce1O54941 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarce1O54941 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarce1O54941 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarce1O54941 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Smarce1O54941 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Smarce1O54941 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarce1O54941 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.09■□□□□ 0.97
Smarce1O54941 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Smarce1O54941 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarce1O54941 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smarce1O54941 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smarce1O54941 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smarce1O54941 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smarce1O54941 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Smarce1O54941 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smarce1O54941 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Smarce1O54941 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.08■□□□□ 0.97
Smarce1O54941 AV356131-201ENSMUST00000206201 750 ntBASIC21.08■□□□□ 0.97
Smarce1O54941 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smarce1O54941 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Smarce1O54941 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarce1O54941 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarce1O54941 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarce1O54941 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarce1O54941 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarce1O54941 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.07■□□□□ 0.96
Smarce1O54941 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.07■□□□□ 0.96
Smarce1O54941 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
Smarce1O54941 Gm5874-201ENSMUST00000096101 508 ntBASIC21.07■□□□□ 0.96
Smarce1O54941 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarce1O54941 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarce1O54941 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarce1O54941 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarce1O54941 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarce1O54941 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarce1O54941 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarce1O54941 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC21.06■□□□□ 0.96
Smarce1O54941 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smarce1O54941 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smarce1O54941 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Smarce1O54941 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Smarce1O54941 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Smarce1O54941 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smarce1O54941 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Smarce1O54941 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.06■□□□□ 0.96
Smarce1O54941 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Smarce1O54941 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.06■□□□□ 0.96
Smarce1O54941 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smarce1O54941 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smarce1O54941 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Smarce1O54941 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Smarce1O54941 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smarce1O54941 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smarce1O54941 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smarce1O54941 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smarce1O54941 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms