Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Itgb3O54890 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Itgb3O54890 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Itgb3O54890 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Itgb3O54890 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Itgb3O54890 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Itgb3O54890 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Itgb3O54890 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.82■□□□□ 0.6
Itgb3O54890 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Itgb3O54890 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.82■□□□□ 0.6
Itgb3O54890 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Itgb3O54890 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.82■□□□□ 0.6
Itgb3O54890 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Itgb3O54890 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Itgb3O54890 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Itgb3O54890 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Itgb3O54890 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Itgb3O54890 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Itgb3O54890 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Itgb3O54890 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Itgb3O54890 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb3O54890 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb3O54890 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb3O54890 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb3O54890 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb3O54890 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb3O54890 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb3O54890 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb3O54890 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb3O54890 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb3O54890 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb3O54890 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb3O54890 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb3O54890 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Itgb3O54890 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb3O54890 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb3O54890 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Itgb3O54890 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb3O54890 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.81■□□□□ 0.6
Itgb3O54890 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.81■□□□□ 0.6
Itgb3O54890 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb3O54890 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb3O54890 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb3O54890 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Itgb3O54890 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb3O54890 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb3O54890 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Itgb3O54890 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Itgb3O54890 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.8■□□□□ 0.6
Itgb3O54890 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Itgb3O54890 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Itgb3O54890 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Itgb3O54890 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Itgb3O54890 Gm10418-201ENSMUST00000100943 576 ntBASIC18.8■□□□□ 0.6
Itgb3O54890 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.8■□□□□ 0.6
Itgb3O54890 Gm29791-202ENSMUST00000207888 369 ntBASIC18.8■□□□□ 0.6
Itgb3O54890 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Itgb3O54890 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Itgb3O54890 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Itgb3O54890 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Itgb3O54890 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itgb3O54890 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Itgb3O54890 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itgb3O54890 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Itgb3O54890 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.79■□□□□ 0.6
Itgb3O54890 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itgb3O54890 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itgb3O54890 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itgb3O54890 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itgb3O54890 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itgb3O54890 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itgb3O54890 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.79■□□□□ 0.6
Itgb3O54890 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itgb3O54890 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itgb3O54890 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itgb3O54890 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Itgb3O54890 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Itgb3O54890 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Itgb3O54890 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Itgb3O54890 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Itgb3O54890 Gm13401-201ENSMUST00000117074 291 ntBASIC18.78■□□□□ 0.6
Itgb3O54890 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Itgb3O54890 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.78■□□□□ 0.6
Itgb3O54890 Gm10517-202ENSMUST00000192970 758 ntBASIC18.78■□□□□ 0.6
Itgb3O54890 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.78■□□□□ 0.6
Itgb3O54890 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Itgb3O54890 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Itgb3O54890 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Itgb3O54890 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.78■□□□□ 0.6
Itgb3O54890 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Itgb3O54890 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Itgb3O54890 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Itgb3O54890 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Itgb3O54890 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Itgb3O54890 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Itgb3O54890 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Itgb3O54890 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Itgb3O54890 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Itgb3O54890 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Itgb3O54890 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms