Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Stx1aO35526 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Stx1aO35526 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Stx1aO35526 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Stx1aO35526 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.01■□□□□ 0.79
Stx1aO35526 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Stx1aO35526 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Stx1aO35526 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.01■□□□□ 0.79
Stx1aO35526 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Stx1aO35526 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Stx1aO35526 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.01■□□□□ 0.79
Stx1aO35526 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Stx1aO35526 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.01■□□□□ 0.79
Stx1aO35526 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Stx1aO35526 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Stx1aO35526 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Stx1aO35526 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Stx1aO35526 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Stx1aO35526 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Stx1aO35526 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Stx1aO35526 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Stx1aO35526 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Stx1aO35526 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Stx1aO35526 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Stx1aO35526 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Stx1aO35526 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Stx1aO35526 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Stx1aO35526 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20■□□□□ 0.79
Stx1aO35526 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Stx1aO35526 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20■□□□□ 0.79
Stx1aO35526 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Stx1aO35526 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Stx1aO35526 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Stx1aO35526 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20■□□□□ 0.79
Stx1aO35526 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Stx1aO35526 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Stx1aO35526 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Stx1aO35526 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Stx1aO35526 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Stx1aO35526 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Stx1aO35526 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Stx1aO35526 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.99■□□□□ 0.79
Stx1aO35526 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Stx1aO35526 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Stx1aO35526 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Stx1aO35526 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Stx1aO35526 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Stx1aO35526 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.99■□□□□ 0.79
Stx1aO35526 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Stx1aO35526 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.98■□□□□ 0.79
Stx1aO35526 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Stx1aO35526 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Stx1aO35526 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.98■□□□□ 0.79
Stx1aO35526 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Stx1aO35526 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Stx1aO35526 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Stx1aO35526 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Stx1aO35526 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Stx1aO35526 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Stx1aO35526 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.97■□□□□ 0.79
Stx1aO35526 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Stx1aO35526 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Stx1aO35526 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Stx1aO35526 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Stx1aO35526 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Stx1aO35526 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.97■□□□□ 0.79
Stx1aO35526 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.97■□□□□ 0.79
Stx1aO35526 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Stx1aO35526 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.97■□□□□ 0.79
Stx1aO35526 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.97■□□□□ 0.79
Stx1aO35526 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Stx1aO35526 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.97■□□□□ 0.79
Stx1aO35526 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Stx1aO35526 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Stx1aO35526 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Stx1aO35526 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Stx1aO35526 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Stx1aO35526 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Stx1aO35526 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Stx1aO35526 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Stx1aO35526 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Stx1aO35526 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Stx1aO35526 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Stx1aO35526 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.96■□□□□ 0.79
Stx1aO35526 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Stx1aO35526 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.96■□□□□ 0.79
Stx1aO35526 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.96■□□□□ 0.79
Stx1aO35526 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Stx1aO35526 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Stx1aO35526 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.96■□□□□ 0.79
Stx1aO35526 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Stx1aO35526 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Stx1aO35526 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Stx1aO35526 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.96■□□□□ 0.79
Stx1aO35526 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Stx1aO35526 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Stx1aO35526 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Stx1aO35526 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.96■□□□□ 0.79
Stx1aO35526 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Stx1aO35526 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms