Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf11O35235 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Tnfsf11O35235 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf11O35235 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf11O35235 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf11O35235 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf11O35235 Haglr-201ENSMUST00000100000 2085 ntBASIC13.87□□□□□ -0.19
Tnfsf11O35235 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf11O35235 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf11O35235 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf11O35235 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf11O35235 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC13.87□□□□□ -0.19
Tnfsf11O35235 Gm12251-201ENSMUST00000117893 792 ntBASIC13.87□□□□□ -0.19
Tnfsf11O35235 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf11O35235 Flvcr1-202ENSMUST00000191946 1216 ntBASIC13.87□□□□□ -0.19
Tnfsf11O35235 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf11O35235 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf11O35235 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf11O35235 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.87□□□□□ -0.19
Tnfsf11O35235 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf11O35235 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf11O35235 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Tnfsf11O35235 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf11O35235 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Tnfsf11O35235 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Tnfsf11O35235 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf11O35235 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf11O35235 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Tnfsf11O35235 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf11O35235 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Tnfsf11O35235 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf11O35235 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf11O35235 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf11O35235 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf11O35235 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Tnfsf11O35235 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf11O35235 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.86□□□□□ -0.19
Tnfsf11O35235 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC13.86□□□□□ -0.19
Tnfsf11O35235 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf11O35235 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Tnfsf11O35235 AC140930.3-201ENSMUST00000222935 274 ntBASIC13.86□□□□□ -0.19
Tnfsf11O35235 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf11O35235 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf11O35235 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.86□□□□□ -0.19
Tnfsf11O35235 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf11O35235 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf11O35235 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf11O35235 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsf11O35235 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsf11O35235 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsf11O35235 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.85□□□□□ -0.19
Tnfsf11O35235 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsf11O35235 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Tnfsf11O35235 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsf11O35235 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Tnfsf11O35235 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.85□□□□□ -0.19
Tnfsf11O35235 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsf11O35235 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Tnfsf11O35235 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Tnfsf11O35235 Smad6-203ENSMUST00000179458 273 ntBASIC13.85□□□□□ -0.19
Tnfsf11O35235 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC13.85□□□□□ -0.19
Tnfsf11O35235 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsf11O35235 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Tnfsf11O35235 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.85□□□□□ -0.19
Tnfsf11O35235 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Tnfsf11O35235 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.85□□□□□ -0.19
Tnfsf11O35235 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Tnfsf11O35235 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsf11O35235 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Tnfsf11O35235 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf11O35235 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf11O35235 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Tnfsf11O35235 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf11O35235 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf11O35235 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf11O35235 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf11O35235 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf11O35235 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Tnfsf11O35235 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Tnfsf11O35235 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf11O35235 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf11O35235 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf11O35235 Gm13241-201ENSMUST00000094493 780 ntBASIC13.84□□□□□ -0.19
Tnfsf11O35235 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.84□□□□□ -0.19
Tnfsf11O35235 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf11O35235 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf11O35235 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Tnfsf11O35235 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf11O35235 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf11O35235 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13.84□□□□□ -0.19
Tnfsf11O35235 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsf11O35235 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Tnfsf11O35235 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Tnfsf11O35235 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.83□□□□□ -0.19
Tnfsf11O35235 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Tnfsf11O35235 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Tnfsf11O35235 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Tnfsf11O35235 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Tnfsf11O35235 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Tnfsf11O35235 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms