Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf2O35218 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.97■□□□□ 0.63
Cpsf2O35218 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf2O35218 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf2O35218 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.97■□□□□ 0.63
Cpsf2O35218 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf2O35218 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf2O35218 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf2O35218 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf2O35218 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.97■□□□□ 0.63
Cpsf2O35218 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf2O35218 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Cpsf2O35218 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf2O35218 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Cpsf2O35218 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Cpsf2O35218 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf2O35218 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf2O35218 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Cpsf2O35218 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf2O35218 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf2O35218 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.97■□□□□ 0.63
Cpsf2O35218 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf2O35218 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf2O35218 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf2O35218 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf2O35218 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.96■□□□□ 0.63
Cpsf2O35218 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf2O35218 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf2O35218 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf2O35218 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf2O35218 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.96■□□□□ 0.63
Cpsf2O35218 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf2O35218 Gm26571-201ENSMUST00000181399 666 ntBASIC18.96■□□□□ 0.63
Cpsf2O35218 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf2O35218 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf2O35218 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf2O35218 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf2O35218 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf2O35218 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.62
Cpsf2O35218 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf2O35218 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.95■□□□□ 0.62
Cpsf2O35218 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf2O35218 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.95■□□□□ 0.62
Cpsf2O35218 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.95■□□□□ 0.62
Cpsf2O35218 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.95■□□□□ 0.62
Cpsf2O35218 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Cpsf2O35218 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf2O35218 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Cpsf2O35218 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf2O35218 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf2O35218 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf2O35218 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf2O35218 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf2O35218 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf2O35218 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Cpsf2O35218 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf2O35218 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf2O35218 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf2O35218 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf2O35218 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf2O35218 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf2O35218 Gm6365-201ENSMUST00000054711 744 ntBASIC18.94■□□□□ 0.62
Cpsf2O35218 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cpsf2O35218 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf2O35218 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.94■□□□□ 0.62
Cpsf2O35218 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf2O35218 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf2O35218 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf2O35218 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf2O35218 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf2O35218 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Cpsf2O35218 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf2O35218 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf2O35218 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf2O35218 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf2O35218 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf2O35218 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cpsf2O35218 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Cpsf2O35218 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.93■□□□□ 0.62
Cpsf2O35218 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.93■□□□□ 0.62
Cpsf2O35218 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf2O35218 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf2O35218 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf2O35218 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf2O35218 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf2O35218 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf2O35218 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf2O35218 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cpsf2O35218 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Cpsf2O35218 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf2O35218 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf2O35218 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf2O35218 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Cpsf2O35218 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Cpsf2O35218 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cpsf2O35218 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.92■□□□□ 0.62
Cpsf2O35218 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf2O35218 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf2O35218 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf2O35218 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms