Protein–RNA interactions for Protein: O35126

Atn1, Atrophin-1, mousemouse

Predictions only

Length 1,175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atn1O35126 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atn1O35126 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atn1O35126 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atn1O35126 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atn1O35126 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atn1O35126 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Atn1O35126 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atn1O35126 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Atn1O35126 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atn1O35126 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atn1O35126 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atn1O35126 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atn1O35126 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atn1O35126 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atn1O35126 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.34■□□□□ 0.37
Atn1O35126 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atn1O35126 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atn1O35126 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atn1O35126 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atn1O35126 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.34■□□□□ 0.37
Atn1O35126 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atn1O35126 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atn1O35126 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atn1O35126 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atn1O35126 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atn1O35126 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.33■□□□□ 0.37
Atn1O35126 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.33■□□□□ 0.37
Atn1O35126 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Atn1O35126 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Atn1O35126 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atn1O35126 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Atn1O35126 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atn1O35126 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atn1O35126 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.33■□□□□ 0.36
Atn1O35126 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atn1O35126 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atn1O35126 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atn1O35126 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atn1O35126 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atn1O35126 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atn1O35126 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atn1O35126 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.32■□□□□ 0.36
Atn1O35126 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atn1O35126 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atn1O35126 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atn1O35126 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atn1O35126 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atn1O35126 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atn1O35126 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Atn1O35126 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atn1O35126 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atn1O35126 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Atn1O35126 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atn1O35126 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atn1O35126 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Atn1O35126 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atn1O35126 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atn1O35126 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atn1O35126 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atn1O35126 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atn1O35126 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atn1O35126 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atn1O35126 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atn1O35126 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Atn1O35126 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.31■□□□□ 0.36
Atn1O35126 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atn1O35126 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atn1O35126 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atn1O35126 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atn1O35126 Gm15039-201ENSMUST00000118914 875 ntBASIC17.31■□□□□ 0.36
Atn1O35126 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Atn1O35126 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.31■□□□□ 0.36
Atn1O35126 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atn1O35126 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.31■□□□□ 0.36
Atn1O35126 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Atn1O35126 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atn1O35126 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atn1O35126 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.3■□□□□ 0.36
Atn1O35126 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atn1O35126 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atn1O35126 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Atn1O35126 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Atn1O35126 Gm10849-201ENSMUST00000100397 618 ntBASIC17.3■□□□□ 0.36
Atn1O35126 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Atn1O35126 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atn1O35126 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.3■□□□□ 0.36
Atn1O35126 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.3■□□□□ 0.36
Atn1O35126 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.3■□□□□ 0.36
Atn1O35126 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atn1O35126 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atn1O35126 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atn1O35126 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Atn1O35126 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atn1O35126 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atn1O35126 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atn1O35126 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atn1O35126 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atn1O35126 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Atn1O35126 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Atn1O35126 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms