Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.23■□□□□ 0.51
Trove2O08848 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trove2O08848 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.23■□□□□ 0.51
Trove2O08848 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trove2O08848 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trove2O08848 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trove2O08848 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.23■□□□□ 0.51
Trove2O08848 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trove2O08848 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trove2O08848 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trove2O08848 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trove2O08848 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Trove2O08848 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trove2O08848 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trove2O08848 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.22■□□□□ 0.51
Trove2O08848 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trove2O08848 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trove2O08848 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Trove2O08848 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Trove2O08848 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.22■□□□□ 0.51
Trove2O08848 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trove2O08848 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trove2O08848 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Trove2O08848 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.22■□□□□ 0.51
Trove2O08848 Reep4-203ENSMUST00000226563 1444 ntBASIC18.22■□□□□ 0.51
Trove2O08848 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trove2O08848 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.22■□□□□ 0.51
Trove2O08848 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trove2O08848 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.21■□□□□ 0.51
Trove2O08848 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.21■□□□□ 0.51
Trove2O08848 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trove2O08848 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trove2O08848 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Trove2O08848 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trove2O08848 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trove2O08848 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.21■□□□□ 0.51
Trove2O08848 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.21■□□□□ 0.51
Trove2O08848 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trove2O08848 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trove2O08848 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
Trove2O08848 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trove2O08848 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trove2O08848 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trove2O08848 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trove2O08848 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trove2O08848 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.2■□□□□ 0.5
Trove2O08848 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trove2O08848 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.2■□□□□ 0.5
Trove2O08848 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trove2O08848 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.2■□□□□ 0.5
Trove2O08848 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trove2O08848 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
Trove2O08848 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trove2O08848 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trove2O08848 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trove2O08848 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.19■□□□□ 0.5
Trove2O08848 Gm42778-201ENSMUST00000199644 553 ntBASIC18.19■□□□□ 0.5
Trove2O08848 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trove2O08848 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trove2O08848 Gm10493-201ENSMUST00000097270 612 ntBASIC18.19■□□□□ 0.5
Trove2O08848 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trove2O08848 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trove2O08848 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Trove2O08848 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trove2O08848 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.19■□□□□ 0.5
Trove2O08848 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trove2O08848 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.18■□□□□ 0.5
Trove2O08848 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trove2O08848 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trove2O08848 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trove2O08848 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trove2O08848 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trove2O08848 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.18■□□□□ 0.5
Trove2O08848 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trove2O08848 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.18■□□□□ 0.5
Trove2O08848 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.18■□□□□ 0.5
Trove2O08848 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trove2O08848 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trove2O08848 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trove2O08848 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trove2O08848 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trove2O08848 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trove2O08848 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trove2O08848 Gm13234-201ENSMUST00000120010 747 ntBASIC18.17■□□□□ 0.5
Trove2O08848 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.17■□□□□ 0.5
Trove2O08848 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.17■□□□□ 0.5
Trove2O08848 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.17■□□□□ 0.5
Trove2O08848 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.17■□□□□ 0.5
Trove2O08848 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trove2O08848 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trove2O08848 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trove2O08848 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trove2O08848 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trove2O08848 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trove2O08848 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trove2O08848 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trove2O08848 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.16■□□□□ 0.5
Trove2O08848 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.16■□□□□ 0.5
Trove2O08848 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trove2O08848 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms