Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ercc2O08811 Mir6349-201ENSMUST00000184059 97 ntBASIC18.19■□□□□ 0.5
Ercc2O08811 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ercc2O08811 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ercc2O08811 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ercc2O08811 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ercc2O08811 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ercc2O08811 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.19■□□□□ 0.5
Ercc2O08811 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ercc2O08811 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
Ercc2O08811 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ercc2O08811 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ercc2O08811 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.18■□□□□ 0.5
Ercc2O08811 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ercc2O08811 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ercc2O08811 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ercc2O08811 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.18■□□□□ 0.5
Ercc2O08811 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.18■□□□□ 0.5
Ercc2O08811 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ercc2O08811 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ercc2O08811 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ercc2O08811 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ercc2O08811 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ercc2O08811 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ercc2O08811 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.17■□□□□ 0.5
Ercc2O08811 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Ercc2O08811 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ercc2O08811 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ercc2O08811 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ercc2O08811 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ercc2O08811 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ercc2O08811 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ercc2O08811 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.17■□□□□ 0.5
Ercc2O08811 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ercc2O08811 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ercc2O08811 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ercc2O08811 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ercc2O08811 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ercc2O08811 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ercc2O08811 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ercc2O08811 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.16■□□□□ 0.5
Ercc2O08811 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ercc2O08811 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ercc2O08811 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ercc2O08811 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ercc2O08811 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ercc2O08811 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.16■□□□□ 0.5
Ercc2O08811 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.16■□□□□ 0.5
Ercc2O08811 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ercc2O08811 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.16■□□□□ 0.5
Ercc2O08811 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ercc2O08811 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ercc2O08811 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ercc2O08811 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ercc2O08811 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ercc2O08811 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.15■□□□□ 0.5
Ercc2O08811 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ercc2O08811 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ercc2O08811 Gm18666-201ENSMUST00000190039 958 ntBASIC18.15■□□□□ 0.5
Ercc2O08811 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ercc2O08811 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.15■□□□□ 0.5
Ercc2O08811 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ercc2O08811 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ercc2O08811 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ercc2O08811 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.15■□□□□ 0.5
Ercc2O08811 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ercc2O08811 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ercc2O08811 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ercc2O08811 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ercc2O08811 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.15■□□□□ 0.5
Ercc2O08811 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ercc2O08811 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ercc2O08811 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ercc2O08811 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ercc2O08811 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ercc2O08811 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ercc2O08811 Gm5643-201ENSMUST00000117081 966 ntBASIC18.14■□□□□ 0.49
Ercc2O08811 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.14■□□□□ 0.49
Ercc2O08811 Gm20760-201ENSMUST00000179197 648 ntBASIC18.14■□□□□ 0.49
Ercc2O08811 Gm29791-202ENSMUST00000207888 369 ntBASIC18.14■□□□□ 0.49
Ercc2O08811 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Ercc2O08811 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ercc2O08811 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ercc2O08811 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ercc2O08811 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Ercc2O08811 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ercc2O08811 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ercc2O08811 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ercc2O08811 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ercc2O08811 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ercc2O08811 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ercc2O08811 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.13■□□□□ 0.49
Ercc2O08811 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.13■□□□□ 0.49
Ercc2O08811 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ercc2O08811 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Ercc2O08811 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.13■□□□□ 0.49
Ercc2O08811 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ercc2O08811 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ercc2O08811 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ercc2O08811 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms