Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Polr2jO08740 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Polr2jO08740 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Polr2jO08740 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Polr2jO08740 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Polr2jO08740 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Polr2jO08740 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Polr2jO08740 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Polr2jO08740 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Polr2jO08740 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Polr2jO08740 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Polr2jO08740 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Polr2jO08740 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Polr2jO08740 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Polr2jO08740 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Polr2jO08740 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.06■□□□□ 0.32
Polr2jO08740 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Polr2jO08740 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Polr2jO08740 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Polr2jO08740 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Polr2jO08740 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Polr2jO08740 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Polr2jO08740 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Polr2jO08740 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Polr2jO08740 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Polr2jO08740 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Polr2jO08740 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
Polr2jO08740 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Polr2jO08740 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.05■□□□□ 0.32
Polr2jO08740 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Polr2jO08740 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.05■□□□□ 0.32
Polr2jO08740 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Polr2jO08740 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Polr2jO08740 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Polr2jO08740 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.05■□□□□ 0.32
Polr2jO08740 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.05■□□□□ 0.32
Polr2jO08740 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Polr2jO08740 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Polr2jO08740 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Polr2jO08740 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Polr2jO08740 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.04■□□□□ 0.32
Polr2jO08740 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Polr2jO08740 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Polr2jO08740 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Polr2jO08740 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.04■□□□□ 0.32
Polr2jO08740 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.04■□□□□ 0.32
Polr2jO08740 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.04■□□□□ 0.32
Polr2jO08740 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Polr2jO08740 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Polr2jO08740 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Polr2jO08740 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Polr2jO08740 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Polr2jO08740 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Polr2jO08740 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Polr2jO08740 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Polr2jO08740 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Polr2jO08740 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Polr2jO08740 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Polr2jO08740 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Polr2jO08740 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Polr2jO08740 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Polr2jO08740 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Polr2jO08740 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.03■□□□□ 0.32
Polr2jO08740 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Polr2jO08740 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Polr2jO08740 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Polr2jO08740 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Polr2jO08740 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Polr2jO08740 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Polr2jO08740 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Polr2jO08740 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Polr2jO08740 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.03■□□□□ 0.32
Polr2jO08740 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Polr2jO08740 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Polr2jO08740 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Polr2jO08740 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Polr2jO08740 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Polr2jO08740 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Polr2jO08740 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Polr2jO08740 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Polr2jO08740 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Polr2jO08740 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.02■□□□□ 0.32
Polr2jO08740 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.02■□□□□ 0.32
Polr2jO08740 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Polr2jO08740 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Polr2jO08740 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.02■□□□□ 0.31
Polr2jO08740 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
Polr2jO08740 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Polr2jO08740 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Polr2jO08740 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Polr2jO08740 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.02■□□□□ 0.31
Polr2jO08740 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Polr2jO08740 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Polr2jO08740 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Polr2jO08740 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Polr2jO08740 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Polr2jO08740 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.01■□□□□ 0.31
Polr2jO08740 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Polr2jO08740 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Polr2jO08740 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms