Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Mir1199-201ENSMUST00000117015 119 ntBASIC19.03■□□□□ 0.64
Usp35M0QWN7 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Usp35M0QWN7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp35M0QWN7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp35M0QWN7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.03■□□□□ 0.64
Usp35M0QWN7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Usp35M0QWN7 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Usp35M0QWN7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp35M0QWN7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Usp35M0QWN7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp35M0QWN7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.02■□□□□ 0.64
Usp35M0QWN7 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.02■□□□□ 0.64
Usp35M0QWN7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.02■□□□□ 0.64
Usp35M0QWN7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.02■□□□□ 0.64
Usp35M0QWN7 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Usp35M0QWN7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Usp35M0QWN7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.02■□□□□ 0.64
Usp35M0QWN7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp35M0QWN7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Usp35M0QWN7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Usp35M0QWN7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Usp35M0QWN7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Usp35M0QWN7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Usp35M0QWN7 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.02■□□□□ 0.63
Usp35M0QWN7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Usp35M0QWN7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp35M0QWN7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp35M0QWN7 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp35M0QWN7 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp35M0QWN7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp35M0QWN7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp35M0QWN7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.01■□□□□ 0.63
Usp35M0QWN7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp35M0QWN7 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp35M0QWN7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp35M0QWN7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.01■□□□□ 0.63
Usp35M0QWN7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Usp35M0QWN7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Usp35M0QWN7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.01■□□□□ 0.63
Usp35M0QWN7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.01■□□□□ 0.63
Usp35M0QWN7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp35M0QWN7 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp35M0QWN7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Usp35M0QWN7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp35M0QWN7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Usp35M0QWN7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Usp35M0QWN7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp35M0QWN7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp35M0QWN7 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19■□□□□ 0.63
Usp35M0QWN7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp35M0QWN7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19■□□□□ 0.63
Usp35M0QWN7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Usp35M0QWN7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp35M0QWN7 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
Usp35M0QWN7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Usp35M0QWN7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19■□□□□ 0.63
Usp35M0QWN7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp35M0QWN7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp35M0QWN7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp35M0QWN7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp35M0QWN7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Usp35M0QWN7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19■□□□□ 0.63
Usp35M0QWN7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp35M0QWN7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Usp35M0QWN7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp35M0QWN7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Usp35M0QWN7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp35M0QWN7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp35M0QWN7 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp35M0QWN7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp35M0QWN7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp35M0QWN7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Usp35M0QWN7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp35M0QWN7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp35M0QWN7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp35M0QWN7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp35M0QWN7 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Usp35M0QWN7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.98■□□□□ 0.63
Usp35M0QWN7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Usp35M0QWN7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp35M0QWN7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp35M0QWN7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Usp35M0QWN7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Usp35M0QWN7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Usp35M0QWN7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp35M0QWN7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp35M0QWN7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp35M0QWN7 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp35M0QWN7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp35M0QWN7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
Usp35M0QWN7 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp35M0QWN7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Usp35M0QWN7 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp35M0QWN7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Usp35M0QWN7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Usp35M0QWN7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Usp35M0QWN7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp35M0QWN7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Usp35M0QWN7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Usp35M0QWN7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms