Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trim34bJ3QNR8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Trim34bJ3QNR8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Trim34bJ3QNR8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.75■■□□□ 1.07
Trim34bJ3QNR8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trim34bJ3QNR8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim34bJ3QNR8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim34bJ3QNR8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim34bJ3QNR8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim34bJ3QNR8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
Trim34bJ3QNR8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim34bJ3QNR8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim34bJ3QNR8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.74■■□□□ 1.07
Trim34bJ3QNR8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trim34bJ3QNR8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC21.74■■□□□ 1.07
Trim34bJ3QNR8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC21.74■■□□□ 1.07
Trim34bJ3QNR8 Gm43353-201ENSMUST00000199224 1295 ntBASIC21.74■■□□□ 1.07
Trim34bJ3QNR8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC21.74■■□□□ 1.07
Trim34bJ3QNR8 Gm18959-201ENSMUST00000208954 655 ntBASIC21.74■■□□□ 1.07
Trim34bJ3QNR8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim34bJ3QNR8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim34bJ3QNR8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim34bJ3QNR8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Trim34bJ3QNR8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim34bJ3QNR8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim34bJ3QNR8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Trim34bJ3QNR8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Trim34bJ3QNR8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trim34bJ3QNR8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim34bJ3QNR8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim34bJ3QNR8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trim34bJ3QNR8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Trim34bJ3QNR8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim34bJ3QNR8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim34bJ3QNR8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.73■■□□□ 1.07
Trim34bJ3QNR8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.73■■□□□ 1.07
Trim34bJ3QNR8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Trim34bJ3QNR8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim34bJ3QNR8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim34bJ3QNR8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Trim34bJ3QNR8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Trim34bJ3QNR8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Trim34bJ3QNR8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim34bJ3QNR8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim34bJ3QNR8 Golph3-205ENSMUST00000228671 2842 ntBASIC21.72■■□□□ 1.07
Trim34bJ3QNR8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim34bJ3QNR8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC21.72■■□□□ 1.07
Trim34bJ3QNR8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim34bJ3QNR8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
Trim34bJ3QNR8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trim34bJ3QNR8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim34bJ3QNR8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim34bJ3QNR8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim34bJ3QNR8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim34bJ3QNR8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim34bJ3QNR8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
Trim34bJ3QNR8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim34bJ3QNR8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim34bJ3QNR8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim34bJ3QNR8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim34bJ3QNR8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim34bJ3QNR8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Trim34bJ3QNR8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.71■■□□□ 1.07
Trim34bJ3QNR8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim34bJ3QNR8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim34bJ3QNR8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim34bJ3QNR8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Trim34bJ3QNR8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC21.7■■□□□ 1.06
Trim34bJ3QNR8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC21.7■■□□□ 1.06
Trim34bJ3QNR8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim34bJ3QNR8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.7■■□□□ 1.06
Trim34bJ3QNR8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Trim34bJ3QNR8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trim34bJ3QNR8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim34bJ3QNR8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim34bJ3QNR8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim34bJ3QNR8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC21.7■■□□□ 1.06
Trim34bJ3QNR8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.7■■□□□ 1.06
Trim34bJ3QNR8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim34bJ3QNR8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim34bJ3QNR8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Trim34bJ3QNR8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim34bJ3QNR8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim34bJ3QNR8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim34bJ3QNR8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trim34bJ3QNR8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Trim34bJ3QNR8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Trim34bJ3QNR8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim34bJ3QNR8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim34bJ3QNR8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trim34bJ3QNR8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC21.69■■□□□ 1.06
Trim34bJ3QNR8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Trim34bJ3QNR8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim34bJ3QNR8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim34bJ3QNR8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim34bJ3QNR8 Gm2274-201ENSMUST00000184539 609 ntBASIC21.68■■□□□ 1.06
Trim34bJ3QNR8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Trim34bJ3QNR8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim34bJ3QNR8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim34bJ3QNR8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms