Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.62■□□□□ 0.09
Trav13d-3J3QMG8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav13d-3J3QMG8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13d-3J3QMG8 Mir2861-201ENSMUST00000175539 82 ntBASIC15.62■□□□□ 0.09
Trav13d-3J3QMG8 Gm27275-201ENSMUST00000184318 272 ntBASIC15.62■□□□□ 0.09
Trav13d-3J3QMG8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.62■□□□□ 0.09
Trav13d-3J3QMG8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13d-3J3QMG8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13d-3J3QMG8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13d-3J3QMG8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Trav13d-3J3QMG8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13d-3J3QMG8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13d-3J3QMG8 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.62■□□□□ 0.09
Trav13d-3J3QMG8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13d-3J3QMG8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13d-3J3QMG8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.61■□□□□ 0.09
Trav13d-3J3QMG8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13d-3J3QMG8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav13d-3J3QMG8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13d-3J3QMG8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13d-3J3QMG8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13d-3J3QMG8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.61■□□□□ 0.09
Trav13d-3J3QMG8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav13d-3J3QMG8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13d-3J3QMG8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13d-3J3QMG8 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.61■□□□□ 0.09
Trav13d-3J3QMG8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav13d-3J3QMG8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13d-3J3QMG8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13d-3J3QMG8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13d-3J3QMG8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13d-3J3QMG8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13d-3J3QMG8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13d-3J3QMG8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13d-3J3QMG8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13d-3J3QMG8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13d-3J3QMG8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13d-3J3QMG8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13d-3J3QMG8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13d-3J3QMG8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13d-3J3QMG8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13d-3J3QMG8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav13d-3J3QMG8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13d-3J3QMG8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav13d-3J3QMG8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13d-3J3QMG8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13d-3J3QMG8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.6■□□□□ 0.09
Trav13d-3J3QMG8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13d-3J3QMG8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13d-3J3QMG8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13d-3J3QMG8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13d-3J3QMG8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav13d-3J3QMG8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13d-3J3QMG8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav13d-3J3QMG8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav13d-3J3QMG8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13d-3J3QMG8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav13d-3J3QMG8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13d-3J3QMG8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav13d-3J3QMG8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13d-3J3QMG8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13d-3J3QMG8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13d-3J3QMG8 Gm10138-203ENSMUST00000206952 366 ntBASIC15.59■□□□□ 0.09
Trav13d-3J3QMG8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav13d-3J3QMG8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13d-3J3QMG8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13d-3J3QMG8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13d-3J3QMG8 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.59■□□□□ 0.09
Trav13d-3J3QMG8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav13d-3J3QMG8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
Trav13d-3J3QMG8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav13d-3J3QMG8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Trav13d-3J3QMG8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav13d-3J3QMG8 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.58■□□□□ 0.08
Trav13d-3J3QMG8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13d-3J3QMG8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13d-3J3QMG8 Gm12527-201ENSMUST00000117967 564 ntBASIC15.58■□□□□ 0.08
Trav13d-3J3QMG8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13d-3J3QMG8 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.58■□□□□ 0.08
Trav13d-3J3QMG8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13d-3J3QMG8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.58■□□□□ 0.08
Trav13d-3J3QMG8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13d-3J3QMG8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13d-3J3QMG8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13d-3J3QMG8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13d-3J3QMG8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13d-3J3QMG8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13d-3J3QMG8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13d-3J3QMG8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13d-3J3QMG8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13d-3J3QMG8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13d-3J3QMG8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13d-3J3QMG8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Trav13d-3J3QMG8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13d-3J3QMG8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13d-3J3QMG8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13d-3J3QMG8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav13d-3J3QMG8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.57■□□□□ 0.08
Trav13d-3J3QMG8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13d-3J3QMG8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms