Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.02■□□□□ 0.48
Ccdc188F6WEU2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Ccdc188F6WEU2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc188F6WEU2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc188F6WEU2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.02■□□□□ 0.48
Ccdc188F6WEU2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc188F6WEU2 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.02■□□□□ 0.48
Ccdc188F6WEU2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.02■□□□□ 0.48
Ccdc188F6WEU2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.02■□□□□ 0.48
Ccdc188F6WEU2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc188F6WEU2 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc188F6WEU2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Ccdc188F6WEU2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Ccdc188F6WEU2 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.02■□□□□ 0.47
Ccdc188F6WEU2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc188F6WEU2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc188F6WEU2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.01■□□□□ 0.47
Ccdc188F6WEU2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc188F6WEU2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.01■□□□□ 0.47
Ccdc188F6WEU2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc188F6WEU2 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Ccdc188F6WEU2 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Ccdc188F6WEU2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.01■□□□□ 0.47
Ccdc188F6WEU2 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc188F6WEU2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.01■□□□□ 0.47
Ccdc188F6WEU2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.01■□□□□ 0.47
Ccdc188F6WEU2 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.01■□□□□ 0.47
Ccdc188F6WEU2 Gm9731-201ENSMUST00000209480 747 ntBASIC18.01■□□□□ 0.47
Ccdc188F6WEU2 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc188F6WEU2 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc188F6WEU2 Il3ra-202ENSMUST00000223589 738 ntBASIC18.01■□□□□ 0.47
Ccdc188F6WEU2 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Ccdc188F6WEU2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc188F6WEU2 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc188F6WEU2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ccdc188F6WEU2 Actl10-202ENSMUST00000226583 1501 ntBASIC18.01■□□□□ 0.47
Ccdc188F6WEU2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc188F6WEU2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc188F6WEU2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.01■□□□□ 0.47
Ccdc188F6WEU2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc188F6WEU2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc188F6WEU2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18■□□□□ 0.47
Ccdc188F6WEU2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18■□□□□ 0.47
Ccdc188F6WEU2 Gm4995-201ENSMUST00000117247 432 ntBASIC18■□□□□ 0.47
Ccdc188F6WEU2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18■□□□□ 0.47
Ccdc188F6WEU2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ccdc188F6WEU2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18■□□□□ 0.47
Ccdc188F6WEU2 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18■□□□□ 0.47
Ccdc188F6WEU2 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18■□□□□ 0.47
Ccdc188F6WEU2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
Ccdc188F6WEU2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ccdc188F6WEU2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
Ccdc188F6WEU2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ccdc188F6WEU2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18■□□□□ 0.47
Ccdc188F6WEU2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc188F6WEU2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc188F6WEU2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc188F6WEU2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc188F6WEU2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.99■□□□□ 0.47
Ccdc188F6WEU2 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc188F6WEU2 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.99■□□□□ 0.47
Ccdc188F6WEU2 Gm43438-201ENSMUST00000198133 379 ntBASIC17.99■□□□□ 0.47
Ccdc188F6WEU2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc188F6WEU2 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc188F6WEU2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc188F6WEU2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.99■□□□□ 0.47
Ccdc188F6WEU2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc188F6WEU2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc188F6WEU2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc188F6WEU2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc188F6WEU2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Ccdc188F6WEU2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc188F6WEU2 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.98■□□□□ 0.47
Ccdc188F6WEU2 Gm14057-201ENSMUST00000120631 482 ntBASIC17.98■□□□□ 0.47
Ccdc188F6WEU2 Gm12350-201ENSMUST00000121208 462 ntBASIC17.98■□□□□ 0.47
Ccdc188F6WEU2 Gm7862-201ENSMUST00000121461 292 ntBASIC17.98■□□□□ 0.47
Ccdc188F6WEU2 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
Ccdc188F6WEU2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.98■□□□□ 0.47
Ccdc188F6WEU2 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.98■□□□□ 0.47
Ccdc188F6WEU2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc188F6WEU2 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc188F6WEU2 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc188F6WEU2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc188F6WEU2 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.98■□□□□ 0.47
Ccdc188F6WEU2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc188F6WEU2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.98■□□□□ 0.47
Ccdc188F6WEU2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc188F6WEU2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc188F6WEU2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc188F6WEU2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ccdc188F6WEU2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc188F6WEU2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc188F6WEU2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc188F6WEU2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc188F6WEU2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc188F6WEU2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.97■□□□□ 0.47
Ccdc188F6WEU2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Ccdc188F6WEU2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.97■□□□□ 0.47
Ccdc188F6WEU2 Gm6296-201ENSMUST00000222599 943 ntBASIC17.97■□□□□ 0.47
Ccdc188F6WEU2 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms