Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atf6F6VAN0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atf6F6VAN0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atf6F6VAN0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atf6F6VAN0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Atf6F6VAN0 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atf6F6VAN0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Atf6F6VAN0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atf6F6VAN0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atf6F6VAN0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.24■□□□□ 0.51
Atf6F6VAN0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atf6F6VAN0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atf6F6VAN0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Atf6F6VAN0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Atf6F6VAN0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Atf6F6VAN0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Atf6F6VAN0 Idnk-204ENSMUST00000226010 1898 ntBASIC18.23■□□□□ 0.51
Atf6F6VAN0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atf6F6VAN0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Atf6F6VAN0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Atf6F6VAN0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atf6F6VAN0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.23■□□□□ 0.51
Atf6F6VAN0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atf6F6VAN0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.23■□□□□ 0.51
Atf6F6VAN0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atf6F6VAN0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atf6F6VAN0 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.23■□□□□ 0.51
Atf6F6VAN0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atf6F6VAN0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atf6F6VAN0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atf6F6VAN0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Atf6F6VAN0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atf6F6VAN0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atf6F6VAN0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atf6F6VAN0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Atf6F6VAN0 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.22■□□□□ 0.51
Atf6F6VAN0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Atf6F6VAN0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atf6F6VAN0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.22■□□□□ 0.51
Atf6F6VAN0 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.22■□□□□ 0.51
Atf6F6VAN0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Atf6F6VAN0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.22■□□□□ 0.51
Atf6F6VAN0 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.22■□□□□ 0.51
Atf6F6VAN0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atf6F6VAN0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atf6F6VAN0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Atf6F6VAN0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.22■□□□□ 0.51
Atf6F6VAN0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atf6F6VAN0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atf6F6VAN0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atf6F6VAN0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atf6F6VAN0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Atf6F6VAN0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.22■□□□□ 0.51
Atf6F6VAN0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atf6F6VAN0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atf6F6VAN0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atf6F6VAN0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Atf6F6VAN0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Atf6F6VAN0 Gm11927-201ENSMUST00000118472 759 ntBASIC18.21■□□□□ 0.51
Atf6F6VAN0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Atf6F6VAN0 Gm2559-201ENSMUST00000201323 363 ntBASIC18.21■□□□□ 0.51
Atf6F6VAN0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.21■□□□□ 0.51
Atf6F6VAN0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.21■□□□□ 0.51
Atf6F6VAN0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Atf6F6VAN0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atf6F6VAN0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Atf6F6VAN0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atf6F6VAN0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atf6F6VAN0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atf6F6VAN0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atf6F6VAN0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Atf6F6VAN0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Atf6F6VAN0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.2■□□□□ 0.5
Atf6F6VAN0 Gm4968-201ENSMUST00000071458 858 ntBASIC18.2■□□□□ 0.5
Atf6F6VAN0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Atf6F6VAN0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atf6F6VAN0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atf6F6VAN0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Atf6F6VAN0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Atf6F6VAN0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atf6F6VAN0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf6F6VAN0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf6F6VAN0 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.19■□□□□ 0.5
Atf6F6VAN0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Atf6F6VAN0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf6F6VAN0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf6F6VAN0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf6F6VAN0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf6F6VAN0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf6F6VAN0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf6F6VAN0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf6F6VAN0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf6F6VAN0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf6F6VAN0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf6F6VAN0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Atf6F6VAN0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.19■□□□□ 0.5
Atf6F6VAN0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atf6F6VAN0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atf6F6VAN0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atf6F6VAN0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms