Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC10.05□□□□□ -0.8
Herc1E9PZP8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Herc1E9PZP8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Herc1E9PZP8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Herc1E9PZP8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Herc1E9PZP8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Herc1E9PZP8 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Herc1E9PZP8 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Herc1E9PZP8 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Herc1E9PZP8 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC10.05□□□□□ -0.8
Herc1E9PZP8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Herc1E9PZP8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Herc1E9PZP8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Herc1E9PZP8 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Herc1E9PZP8 AC120002.2-201ENSMUST00000220205 773 ntBASIC10.05□□□□□ -0.8
Herc1E9PZP8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Herc1E9PZP8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Herc1E9PZP8 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
Herc1E9PZP8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Herc1E9PZP8 Actl10-202ENSMUST00000226583 1501 ntBASIC10.05□□□□□ -0.8
Herc1E9PZP8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Herc1E9PZP8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Herc1E9PZP8 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Herc1E9PZP8 Mir6977-201ENSMUST00000184960 64 ntBASIC10.05□□□□□ -0.8
Herc1E9PZP8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC10.05□□□□□ -0.8
Herc1E9PZP8 Gm20634-201ENSMUST00000090779 2956 ntBASIC10.04□□□□□ -0.8
Herc1E9PZP8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Herc1E9PZP8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Herc1E9PZP8 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Herc1E9PZP8 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Herc1E9PZP8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Herc1E9PZP8 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Herc1E9PZP8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Herc1E9PZP8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Herc1E9PZP8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
Herc1E9PZP8 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC10.04□□□□□ -0.8
Herc1E9PZP8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Herc1E9PZP8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Herc1E9PZP8 Gm15043-201ENSMUST00000118843 1543 ntBASIC10.04□□□□□ -0.8
Herc1E9PZP8 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Herc1E9PZP8 Gm44872-201ENSMUST00000207864 420 ntBASIC10.04□□□□□ -0.8
Herc1E9PZP8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC10.04□□□□□ -0.8
Herc1E9PZP8 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Herc1E9PZP8 AC090659.1-201ENSMUST00000224334 768 ntBASIC10.04□□□□□ -0.8
Herc1E9PZP8 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Herc1E9PZP8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Herc1E9PZP8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Herc1E9PZP8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Herc1E9PZP8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Herc1E9PZP8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Herc1E9PZP8 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Herc1E9PZP8 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Herc1E9PZP8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Herc1E9PZP8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Herc1E9PZP8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC10.03□□□□□ -0.8
Herc1E9PZP8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Herc1E9PZP8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Herc1E9PZP8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC10.03□□□□□ -0.8
Herc1E9PZP8 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC10.03□□□□□ -0.8
Herc1E9PZP8 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Herc1E9PZP8 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Herc1E9PZP8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Herc1E9PZP8 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Herc1E9PZP8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Herc1E9PZP8 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC10.03□□□□□ -0.8
Herc1E9PZP8 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Herc1E9PZP8 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Herc1E9PZP8 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC10.03□□□□□ -0.8
Herc1E9PZP8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Herc1E9PZP8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Herc1E9PZP8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Herc1E9PZP8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Herc1E9PZP8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Herc1E9PZP8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Herc1E9PZP8 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Herc1E9PZP8 H2-Pa-201ENSMUST00000182803 626 ntBASIC10.03□□□□□ -0.8
Herc1E9PZP8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Herc1E9PZP8 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Herc1E9PZP8 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Herc1E9PZP8 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Herc1E9PZP8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC10.03□□□□□ -0.8
Herc1E9PZP8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Herc1E9PZP8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Herc1E9PZP8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Herc1E9PZP8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
Herc1E9PZP8 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Herc1E9PZP8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC10.02□□□□□ -0.8
Herc1E9PZP8 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Herc1E9PZP8 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Herc1E9PZP8 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Herc1E9PZP8 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Herc1E9PZP8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC10.02□□□□□ -0.8
Herc1E9PZP8 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Herc1E9PZP8 Mir3547-201ENSMUST00000175461 88 ntBASIC10.02□□□□□ -0.81
Herc1E9PZP8 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Herc1E9PZP8 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Herc1E9PZP8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Herc1E9PZP8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Herc1E9PZP8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Herc1E9PZP8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms