Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Syce3B5KM66 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Syce3B5KM66 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Syce3B5KM66 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Syce3B5KM66 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Syce3B5KM66 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Syce3B5KM66 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Syce3B5KM66 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Syce3B5KM66 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Syce3B5KM66 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Syce3B5KM66 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.37■□□□□ 0.85
Syce3B5KM66 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.37■□□□□ 0.85
Syce3B5KM66 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Syce3B5KM66 Gm40848-201ENSMUST00000221998 324 ntBASIC20.37■□□□□ 0.85
Syce3B5KM66 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Syce3B5KM66 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Syce3B5KM66 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Syce3B5KM66 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.37■□□□□ 0.85
Syce3B5KM66 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Syce3B5KM66 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Syce3B5KM66 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Syce3B5KM66 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Syce3B5KM66 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Syce3B5KM66 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Syce3B5KM66 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Syce3B5KM66 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Syce3B5KM66 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Syce3B5KM66 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Syce3B5KM66 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Syce3B5KM66 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Syce3B5KM66 Gm8493-201ENSMUST00000196881 489 ntBASIC20.36■□□□□ 0.85
Syce3B5KM66 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Syce3B5KM66 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Syce3B5KM66 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Syce3B5KM66 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Syce3B5KM66 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Syce3B5KM66 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Syce3B5KM66 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Syce3B5KM66 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Syce3B5KM66 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Syce3B5KM66 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Syce3B5KM66 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Syce3B5KM66 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.35■□□□□ 0.85
Syce3B5KM66 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.35■□□□□ 0.85
Syce3B5KM66 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Syce3B5KM66 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.35■□□□□ 0.85
Syce3B5KM66 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Syce3B5KM66 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Syce3B5KM66 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Syce3B5KM66 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Syce3B5KM66 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.35■□□□□ 0.85
Syce3B5KM66 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Syce3B5KM66 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Syce3B5KM66 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Syce3B5KM66 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.34■□□□□ 0.85
Syce3B5KM66 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Syce3B5KM66 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Syce3B5KM66 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Syce3B5KM66 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.34■□□□□ 0.85
Syce3B5KM66 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Syce3B5KM66 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Syce3B5KM66 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Syce3B5KM66 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.34■□□□□ 0.85
Syce3B5KM66 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Syce3B5KM66 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Syce3B5KM66 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Syce3B5KM66 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Syce3B5KM66 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Syce3B5KM66 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Syce3B5KM66 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Syce3B5KM66 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Syce3B5KM66 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.33■□□□□ 0.85
Syce3B5KM66 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Syce3B5KM66 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Syce3B5KM66 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Syce3B5KM66 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Syce3B5KM66 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
Syce3B5KM66 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Syce3B5KM66 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Syce3B5KM66 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Syce3B5KM66 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Syce3B5KM66 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Syce3B5KM66 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Syce3B5KM66 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Syce3B5KM66 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Syce3B5KM66 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.32■□□□□ 0.84
Syce3B5KM66 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.32■□□□□ 0.84
Syce3B5KM66 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.32■□□□□ 0.84
Syce3B5KM66 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.32■□□□□ 0.84
Syce3B5KM66 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Syce3B5KM66 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Syce3B5KM66 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Syce3B5KM66 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Syce3B5KM66 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Syce3B5KM66 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.31■□□□□ 0.84
Syce3B5KM66 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Syce3B5KM66 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Syce3B5KM66 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Syce3B5KM66 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Syce3B5KM66 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms