Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Ank2-226ENSMUST00000189368 339 ntBASIC20.6■□□□□ 0.89
Clrn2B2RVW2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clrn2B2RVW2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clrn2B2RVW2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clrn2B2RVW2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.6■□□□□ 0.89
Clrn2B2RVW2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clrn2B2RVW2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Clrn2B2RVW2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.6■□□□□ 0.89
Clrn2B2RVW2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Clrn2B2RVW2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clrn2B2RVW2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Clrn2B2RVW2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clrn2B2RVW2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.59■□□□□ 0.89
Clrn2B2RVW2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.59■□□□□ 0.89
Clrn2B2RVW2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Clrn2B2RVW2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clrn2B2RVW2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Clrn2B2RVW2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clrn2B2RVW2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clrn2B2RVW2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Clrn2B2RVW2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clrn2B2RVW2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clrn2B2RVW2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.58■□□□□ 0.89
Clrn2B2RVW2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clrn2B2RVW2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Clrn2B2RVW2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.58■□□□□ 0.89
Clrn2B2RVW2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Clrn2B2RVW2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Clrn2B2RVW2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clrn2B2RVW2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clrn2B2RVW2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clrn2B2RVW2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clrn2B2RVW2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clrn2B2RVW2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.88
Clrn2B2RVW2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clrn2B2RVW2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clrn2B2RVW2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clrn2B2RVW2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clrn2B2RVW2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Clrn2B2RVW2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clrn2B2RVW2 Gm9103-201ENSMUST00000119371 405 ntBASIC20.57■□□□□ 0.88
Clrn2B2RVW2 Gm7284-201ENSMUST00000131667 944 ntBASIC20.57■□□□□ 0.88
Clrn2B2RVW2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Clrn2B2RVW2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.57■□□□□ 0.88
Clrn2B2RVW2 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.57■□□□□ 0.88
Clrn2B2RVW2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
Clrn2B2RVW2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clrn2B2RVW2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clrn2B2RVW2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Clrn2B2RVW2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
Clrn2B2RVW2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Clrn2B2RVW2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clrn2B2RVW2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clrn2B2RVW2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clrn2B2RVW2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clrn2B2RVW2 Gm7370-201ENSMUST00000219471 767 ntBASIC20.56■□□□□ 0.88
Clrn2B2RVW2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Clrn2B2RVW2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clrn2B2RVW2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clrn2B2RVW2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Clrn2B2RVW2 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.56■□□□□ 0.88
Clrn2B2RVW2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clrn2B2RVW2 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.56■□□□□ 0.88
Clrn2B2RVW2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Clrn2B2RVW2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Clrn2B2RVW2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clrn2B2RVW2 Tgds-204ENSMUST00000228543 1594 ntBASIC20.55■□□□□ 0.88
Clrn2B2RVW2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clrn2B2RVW2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clrn2B2RVW2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clrn2B2RVW2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Clrn2B2RVW2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clrn2B2RVW2 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.55■□□□□ 0.88
Clrn2B2RVW2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clrn2B2RVW2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clrn2B2RVW2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clrn2B2RVW2 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Clrn2B2RVW2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clrn2B2RVW2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clrn2B2RVW2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clrn2B2RVW2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Clrn2B2RVW2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.55■□□□□ 0.88
Clrn2B2RVW2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clrn2B2RVW2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Clrn2B2RVW2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clrn2B2RVW2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Clrn2B2RVW2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clrn2B2RVW2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clrn2B2RVW2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clrn2B2RVW2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clrn2B2RVW2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clrn2B2RVW2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.53■□□□□ 0.88
Clrn2B2RVW2 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Clrn2B2RVW2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.53■□□□□ 0.88
Clrn2B2RVW2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Clrn2B2RVW2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clrn2B2RVW2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clrn2B2RVW2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clrn2B2RVW2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clrn2B2RVW2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms