Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp42B2RQC2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp42B2RQC2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp42B2RQC2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp42B2RQC2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.79■□□□□ 0.92
Usp42B2RQC2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Usp42B2RQC2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp42B2RQC2 Gm6576-201ENSMUST00000169678 883 ntBASIC20.78■□□□□ 0.92
Usp42B2RQC2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.78■□□□□ 0.92
Usp42B2RQC2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp42B2RQC2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp42B2RQC2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp42B2RQC2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.78■□□□□ 0.92
Usp42B2RQC2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp42B2RQC2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usp42B2RQC2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.78■□□□□ 0.92
Usp42B2RQC2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp42B2RQC2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usp42B2RQC2 Mir8112-201ENSMUST00000184382 131 ntBASIC20.78■□□□□ 0.92
Usp42B2RQC2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.78■□□□□ 0.92
Usp42B2RQC2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.78■□□□□ 0.92
Usp42B2RQC2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.77■□□□□ 0.92
Usp42B2RQC2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp42B2RQC2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Usp42B2RQC2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Usp42B2RQC2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp42B2RQC2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Usp42B2RQC2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp42B2RQC2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Usp42B2RQC2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp42B2RQC2 Gm22240-201ENSMUST00000175225 82 ntBASIC20.77■□□□□ 0.91
Usp42B2RQC2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Usp42B2RQC2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Usp42B2RQC2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Usp42B2RQC2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Usp42B2RQC2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.76■□□□□ 0.91
Usp42B2RQC2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp42B2RQC2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp42B2RQC2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp42B2RQC2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp42B2RQC2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp42B2RQC2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
Usp42B2RQC2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Usp42B2RQC2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp42B2RQC2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp42B2RQC2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp42B2RQC2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.76■□□□□ 0.91
Usp42B2RQC2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp42B2RQC2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.76■□□□□ 0.91
Usp42B2RQC2 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.76■□□□□ 0.91
Usp42B2RQC2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp42B2RQC2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp42B2RQC2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp42B2RQC2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Usp42B2RQC2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp42B2RQC2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp42B2RQC2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp42B2RQC2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp42B2RQC2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp42B2RQC2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp42B2RQC2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp42B2RQC2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Usp42B2RQC2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp42B2RQC2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.75■□□□□ 0.91
Usp42B2RQC2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp42B2RQC2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp42B2RQC2 Gm12382-201ENSMUST00000122005 922 ntBASIC20.75■□□□□ 0.91
Usp42B2RQC2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.75■□□□□ 0.91
Usp42B2RQC2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp42B2RQC2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp42B2RQC2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp42B2RQC2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.74■□□□□ 0.91
Usp42B2RQC2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp42B2RQC2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.74■□□□□ 0.91
Usp42B2RQC2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp42B2RQC2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp42B2RQC2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp42B2RQC2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp42B2RQC2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp42B2RQC2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Usp42B2RQC2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Usp42B2RQC2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Usp42B2RQC2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Usp42B2RQC2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Usp42B2RQC2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp42B2RQC2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp42B2RQC2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp42B2RQC2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.73■□□□□ 0.91
Usp42B2RQC2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Usp42B2RQC2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp42B2RQC2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.73■□□□□ 0.91
Usp42B2RQC2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.73■□□□□ 0.91
Usp42B2RQC2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp42B2RQC2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Usp42B2RQC2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp42B2RQC2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp42B2RQC2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Usp42B2RQC2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.72■□□□□ 0.91
Usp42B2RQC2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Usp42B2RQC2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms