Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.45□□□□□ -0.26
Col6a5A6H584 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.45□□□□□ -0.26
Col6a5A6H584 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.45□□□□□ -0.26
Col6a5A6H584 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Col6a5A6H584 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a5A6H584 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.45□□□□□ -0.26
Col6a5A6H584 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a5A6H584 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.45□□□□□ -0.26
Col6a5A6H584 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Col6a5A6H584 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a5A6H584 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a5A6H584 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a5A6H584 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC13.45□□□□□ -0.26
Col6a5A6H584 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.45□□□□□ -0.26
Col6a5A6H584 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a5A6H584 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a5A6H584 Mir770-201ENSMUST00000103252 94 ntBASIC13.44□□□□□ -0.26
Col6a5A6H584 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.44□□□□□ -0.26
Col6a5A6H584 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.44□□□□□ -0.26
Col6a5A6H584 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Col6a5A6H584 Gm4974-201ENSMUST00000209974 875 ntBASIC13.44□□□□□ -0.26
Col6a5A6H584 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a5A6H584 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a5A6H584 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a5A6H584 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a5A6H584 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a5A6H584 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Col6a5A6H584 Actl10-202ENSMUST00000226583 1501 ntBASIC13.44□□□□□ -0.26
Col6a5A6H584 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a5A6H584 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a5A6H584 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a5A6H584 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a5A6H584 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Col6a5A6H584 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.44□□□□□ -0.26
Col6a5A6H584 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a5A6H584 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a5A6H584 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a5A6H584 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a5A6H584 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a5A6H584 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a5A6H584 Gm5540-201ENSMUST00000131852 1848 ntBASIC13.44□□□□□ -0.26
Col6a5A6H584 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a5A6H584 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a5A6H584 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a5A6H584 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a5A6H584 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a5A6H584 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a5A6H584 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a5A6H584 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a5A6H584 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a5A6H584 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a5A6H584 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a5A6H584 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a5A6H584 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a5A6H584 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.43□□□□□ -0.26
Col6a5A6H584 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a5A6H584 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.43□□□□□ -0.26
Col6a5A6H584 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.43□□□□□ -0.26
Col6a5A6H584 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.43□□□□□ -0.26
Col6a5A6H584 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a5A6H584 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a5A6H584 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a5A6H584 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.43□□□□□ -0.26
Col6a5A6H584 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.43□□□□□ -0.26
Col6a5A6H584 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a5A6H584 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.43□□□□□ -0.26
Col6a5A6H584 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.43□□□□□ -0.26
Col6a5A6H584 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a5A6H584 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a5A6H584 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a5A6H584 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a5A6H584 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a5A6H584 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a5A6H584 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a5A6H584 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a5A6H584 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a5A6H584 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Col6a5A6H584 Mir5131-201ENSMUST00000175426 93 ntBASIC13.42□□□□□ -0.26
Col6a5A6H584 Gm44357-201ENSMUST00000195897 142 ntBASIC13.42□□□□□ -0.26
Col6a5A6H584 Gm19658-201ENSMUST00000196231 138 ntBASIC13.42□□□□□ -0.26
Col6a5A6H584 Gm44367-201ENSMUST00000196836 138 ntBASIC13.42□□□□□ -0.26
Col6a5A6H584 Gm44350-201ENSMUST00000197197 138 ntBASIC13.42□□□□□ -0.26
Col6a5A6H584 Gm44390-201ENSMUST00000197533 144 ntBASIC13.42□□□□□ -0.26
Col6a5A6H584 Gm44313-201ENSMUST00000198018 138 ntBASIC13.42□□□□□ -0.26
Col6a5A6H584 Gm44486-201ENSMUST00000198508 138 ntBASIC13.42□□□□□ -0.26
Col6a5A6H584 Gm44454-201ENSMUST00000198541 138 ntBASIC13.42□□□□□ -0.26
Col6a5A6H584 Gm44314-201ENSMUST00000199263 138 ntBASIC13.42□□□□□ -0.26
Col6a5A6H584 Gm44394-201ENSMUST00000199558 138 ntBASIC13.42□□□□□ -0.26
Col6a5A6H584 Gm44484-201ENSMUST00000199873 138 ntBASIC13.42□□□□□ -0.26
Col6a5A6H584 Gm44466-201ENSMUST00000200264 138 ntBASIC13.42□□□□□ -0.26
Col6a5A6H584 Gm44359-201ENSMUST00000200671 138 ntBASIC13.42□□□□□ -0.26
Col6a5A6H584 Psmb5-202ENSMUST00000227257 622 ntBASIC13.42□□□□□ -0.26
Col6a5A6H584 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a5A6H584 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a5A6H584 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Col6a5A6H584 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a5A6H584 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a5A6H584 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
Col6a5A6H584 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a5A6H584 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms