Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chd6A3KFM7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chd6A3KFM7 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chd6A3KFM7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chd6A3KFM7 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chd6A3KFM7 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chd6A3KFM7 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.48□□□□□ -0.09
Chd6A3KFM7 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.48□□□□□ -0.09
Chd6A3KFM7 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chd6A3KFM7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chd6A3KFM7 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chd6A3KFM7 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chd6A3KFM7 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chd6A3KFM7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chd6A3KFM7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chd6A3KFM7 Gm13042-201ENSMUST00000119244 1955 ntBASIC14.47□□□□□ -0.09
Chd6A3KFM7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd6A3KFM7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chd6A3KFM7 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd6A3KFM7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd6A3KFM7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd6A3KFM7 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd6A3KFM7 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.47□□□□□ -0.09
Chd6A3KFM7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chd6A3KFM7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Chd6A3KFM7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Chd6A3KFM7 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Chd6A3KFM7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd6A3KFM7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd6A3KFM7 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chd6A3KFM7 Gm5745-201ENSMUST00000183748 313 ntBASIC14.47□□□□□ -0.09
Chd6A3KFM7 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.47□□□□□ -0.09
Chd6A3KFM7 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.47□□□□□ -0.09
Chd6A3KFM7 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd6A3KFM7 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd6A3KFM7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd6A3KFM7 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chd6A3KFM7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd6A3KFM7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chd6A3KFM7 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.46□□□□□ -0.09
Chd6A3KFM7 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.46□□□□□ -0.09
Chd6A3KFM7 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.46□□□□□ -0.09
Chd6A3KFM7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.46□□□□□ -0.09
Chd6A3KFM7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd6A3KFM7 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd6A3KFM7 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.1
Chd6A3KFM7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Chd6A3KFM7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chd6A3KFM7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chd6A3KFM7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Chd6A3KFM7 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd6A3KFM7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd6A3KFM7 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.45□□□□□ -0.1
Chd6A3KFM7 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.45□□□□□ -0.1
Chd6A3KFM7 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.45□□□□□ -0.1
Chd6A3KFM7 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Chd6A3KFM7 Gm7213-201ENSMUST00000215977 950 ntBASIC14.45□□□□□ -0.1
Chd6A3KFM7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd6A3KFM7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chd6A3KFM7 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd6A3KFM7 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.45□□□□□ -0.1
Chd6A3KFM7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chd6A3KFM7 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd6A3KFM7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd6A3KFM7 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chd6A3KFM7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd6A3KFM7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd6A3KFM7 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.44□□□□□ -0.1
Chd6A3KFM7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chd6A3KFM7 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chd6A3KFM7 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Chd6A3KFM7 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chd6A3KFM7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chd6A3KFM7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chd6A3KFM7 Gm7638-201ENSMUST00000121348 967 ntBASIC14.44□□□□□ -0.1
Chd6A3KFM7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chd6A3KFM7 Gm26308-201ENSMUST00000157768 69 ntBASIC14.44□□□□□ -0.1
Chd6A3KFM7 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chd6A3KFM7 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chd6A3KFM7 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Chd6A3KFM7 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chd6A3KFM7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chd6A3KFM7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chd6A3KFM7 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Chd6A3KFM7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chd6A3KFM7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.43□□□□□ -0.1
Chd6A3KFM7 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Chd6A3KFM7 Gm7862-201ENSMUST00000121461 292 ntBASIC14.43□□□□□ -0.1
Chd6A3KFM7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.43□□□□□ -0.1
Chd6A3KFM7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chd6A3KFM7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chd6A3KFM7 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chd6A3KFM7 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chd6A3KFM7 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Chd6A3KFM7 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.43□□□□□ -0.1
Chd6A3KFM7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chd6A3KFM7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Chd6A3KFM7 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chd6A3KFM7 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chd6A3KFM7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms