Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.69■□□□□ 0.58
Scn1aA2APX8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn1aA2APX8 Gm10517-202ENSMUST00000192970 758 ntBASIC18.69■□□□□ 0.58
Scn1aA2APX8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scn1aA2APX8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn1aA2APX8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn1aA2APX8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn1aA2APX8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scn1aA2APX8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn1aA2APX8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Scn1aA2APX8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn1aA2APX8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn1aA2APX8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Scn1aA2APX8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn1aA2APX8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scn1aA2APX8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.68■□□□□ 0.58
Scn1aA2APX8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn1aA2APX8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Scn1aA2APX8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn1aA2APX8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn1aA2APX8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn1aA2APX8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn1aA2APX8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.67■□□□□ 0.58
Scn1aA2APX8 Gm38027-201ENSMUST00000192315 235 ntBASIC18.67■□□□□ 0.58
Scn1aA2APX8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn1aA2APX8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn1aA2APX8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Scn1aA2APX8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn1aA2APX8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Scn1aA2APX8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Scn1aA2APX8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn1aA2APX8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.67■□□□□ 0.58
Scn1aA2APX8 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.66■□□□□ 0.58
Scn1aA2APX8 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.66■□□□□ 0.58
Scn1aA2APX8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scn1aA2APX8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn1aA2APX8 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Scn1aA2APX8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Scn1aA2APX8 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.66■□□□□ 0.58
Scn1aA2APX8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn1aA2APX8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.66■□□□□ 0.58
Scn1aA2APX8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn1aA2APX8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn1aA2APX8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.66■□□□□ 0.58
Scn1aA2APX8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Scn1aA2APX8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn1aA2APX8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.66■□□□□ 0.58
Scn1aA2APX8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn1aA2APX8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn1aA2APX8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn1aA2APX8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn1aA2APX8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn1aA2APX8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn1aA2APX8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scn1aA2APX8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn1aA2APX8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scn1aA2APX8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.65■□□□□ 0.58
Scn1aA2APX8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn1aA2APX8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Scn1aA2APX8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn1aA2APX8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Scn1aA2APX8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn1aA2APX8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn1aA2APX8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Scn1aA2APX8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Scn1aA2APX8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.64■□□□□ 0.58
Scn1aA2APX8 Gm11539-201ENSMUST00000119837 557 ntBASIC18.64■□□□□ 0.58
Scn1aA2APX8 Gm13436-201ENSMUST00000120418 567 ntBASIC18.64■□□□□ 0.58
Scn1aA2APX8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Scn1aA2APX8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn1aA2APX8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn1aA2APX8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn1aA2APX8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn1aA2APX8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn1aA2APX8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Scn1aA2APX8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn1aA2APX8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Scn1aA2APX8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn1aA2APX8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn1aA2APX8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scn1aA2APX8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Scn1aA2APX8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Scn1aA2APX8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Scn1aA2APX8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.63■□□□□ 0.57
Scn1aA2APX8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn1aA2APX8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scn1aA2APX8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Scn1aA2APX8 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.63■□□□□ 0.57
Scn1aA2APX8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Scn1aA2APX8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn1aA2APX8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn1aA2APX8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn1aA2APX8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn1aA2APX8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Scn1aA2APX8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.62■□□□□ 0.57
Scn1aA2APX8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Scn1aA2APX8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn1aA2APX8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn1aA2APX8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn1aA2APX8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms