Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm6296-201ENSMUST00000222599 943 ntBASIC9.43□□□□□ -0.9
Ubr4A2AN08 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ubr4A2AN08 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Ubr4A2AN08 Gm32996-201ENSMUST00000199828 1447 ntBASIC9.43□□□□□ -0.9
Ubr4A2AN08 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ubr4A2AN08 Gm20949-201ENSMUST00000206478 952 ntBASIC9.43□□□□□ -0.9
Ubr4A2AN08 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC9.43□□□□□ -0.9
Ubr4A2AN08 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ubr4A2AN08 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ubr4A2AN08 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ubr4A2AN08 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ubr4A2AN08 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ubr4A2AN08 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ubr4A2AN08 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC9.42□□□□□ -0.9
Ubr4A2AN08 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ubr4A2AN08 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Ubr4A2AN08 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Ubr4A2AN08 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ubr4A2AN08 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC9.42□□□□□ -0.9
Ubr4A2AN08 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ubr4A2AN08 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Ubr4A2AN08 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ubr4A2AN08 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Ubr4A2AN08 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Ubr4A2AN08 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ubr4A2AN08 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC9.42□□□□□ -0.9
Ubr4A2AN08 Gm37035-201ENSMUST00000194809 2148 ntBASIC9.42□□□□□ -0.9
Ubr4A2AN08 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ubr4A2AN08 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Ubr4A2AN08 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ubr4A2AN08 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Ubr4A2AN08 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
Ubr4A2AN08 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC9.42□□□□□ -0.9
Ubr4A2AN08 AC131187.1-201ENSMUST00000224567 809 ntBASIC9.42□□□□□ -0.9
Ubr4A2AN08 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC9.42□□□□□ -0.9
Ubr4A2AN08 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Ubr4A2AN08 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ubr4A2AN08 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC9.42□□□□□ -0.9
Ubr4A2AN08 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
Ubr4A2AN08 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ubr4A2AN08 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC9.42□□□□□ -0.9
Ubr4A2AN08 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC9.42□□□□□ -0.9
Ubr4A2AN08 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC9.42□□□□□ -0.9
Ubr4A2AN08 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ubr4A2AN08 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC9.42□□□□□ -0.9
Ubr4A2AN08 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ubr4A2AN08 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ubr4A2AN08 Gm13616-201ENSMUST00000120600 222 ntBASIC9.41□□□□□ -0.9
Ubr4A2AN08 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC9.41□□□□□ -0.9
Ubr4A2AN08 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ubr4A2AN08 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC9.41□□□□□ -0.9
Ubr4A2AN08 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ubr4A2AN08 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ubr4A2AN08 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ubr4A2AN08 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC9.41□□□□□ -0.9
Ubr4A2AN08 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC9.41□□□□□ -0.9
Ubr4A2AN08 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ubr4A2AN08 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Ubr4A2AN08 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ubr4A2AN08 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Ubr4A2AN08 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC9.41□□□□□ -0.9
Ubr4A2AN08 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC9.41□□□□□ -0.9
Ubr4A2AN08 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC9.41□□□□□ -0.9
Ubr4A2AN08 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ubr4A2AN08 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ubr4A2AN08 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ubr4A2AN08 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ubr4A2AN08 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC9.41□□□□□ -0.9
Ubr4A2AN08 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC9.41□□□□□ -0.9
Ubr4A2AN08 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ubr4A2AN08 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ubr4A2AN08 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ubr4A2AN08 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ubr4A2AN08 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ubr4A2AN08 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
Ubr4A2AN08 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ubr4A2AN08 AC154527.4-201ENSMUST00000224364 1667 ntBASIC9.4□□□□□ -0.9
Ubr4A2AN08 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ubr4A2AN08 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ubr4A2AN08 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC9.4□□□□□ -0.9
Ubr4A2AN08 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ubr4A2AN08 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Ubr4A2AN08 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Ubr4A2AN08 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ubr4A2AN08 Actl10-202ENSMUST00000226583 1501 ntBASIC9.4□□□□□ -0.9
Ubr4A2AN08 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Ubr4A2AN08 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ubr4A2AN08 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ubr4A2AN08 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ubr4A2AN08 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ubr4A2AN08 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ubr4A2AN08 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ubr4A2AN08 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC9.4□□□□□ -0.91
Ubr4A2AN08 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ubr4A2AN08 Zkscan4-202ENSMUST00000225845 1506 ntBASIC9.4□□□□□ -0.91
Ubr4A2AN08 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Ubr4A2AN08 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ubr4A2AN08 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.91
Ubr4A2AN08 AC154222.1-201ENSMUST00000223882 475 ntBASIC9.4□□□□□ -0.91
Ubr4A2AN08 AC238811.3-201ENSMUST00000225422 709 ntBASIC9.4□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms