Protein–RNA interactions for Protein: A2ACP1

Ttc39a, Tetratricopeptide repeat protein 39A, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39aA2ACP1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ttc39aA2ACP1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.36■□□□□ 0.37
Ttc39aA2ACP1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.36■□□□□ 0.37
Ttc39aA2ACP1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ttc39aA2ACP1 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ttc39aA2ACP1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ttc39aA2ACP1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.36■□□□□ 0.37
Ttc39aA2ACP1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.36■□□□□ 0.37
Ttc39aA2ACP1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ttc39aA2ACP1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ttc39aA2ACP1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ttc39aA2ACP1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ttc39aA2ACP1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ttc39aA2ACP1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ttc39aA2ACP1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.35■□□□□ 0.37
Ttc39aA2ACP1 Gm11539-201ENSMUST00000119837 557 ntBASIC17.35■□□□□ 0.37
Ttc39aA2ACP1 Gm13436-201ENSMUST00000120418 567 ntBASIC17.35■□□□□ 0.37
Ttc39aA2ACP1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ttc39aA2ACP1 Gm27463-201ENSMUST00000183569 57 ntBASIC17.35■□□□□ 0.37
Ttc39aA2ACP1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ttc39aA2ACP1 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.35■□□□□ 0.37
Ttc39aA2ACP1 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.35■□□□□ 0.37
Ttc39aA2ACP1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ttc39aA2ACP1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ttc39aA2ACP1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ttc39aA2ACP1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ttc39aA2ACP1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ttc39aA2ACP1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ttc39aA2ACP1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ttc39aA2ACP1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ttc39aA2ACP1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ttc39aA2ACP1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ttc39aA2ACP1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ttc39aA2ACP1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ttc39aA2ACP1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ttc39aA2ACP1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ttc39aA2ACP1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ttc39aA2ACP1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ttc39aA2ACP1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ttc39aA2ACP1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ttc39aA2ACP1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ttc39aA2ACP1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ttc39aA2ACP1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ttc39aA2ACP1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Ttc39aA2ACP1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ttc39aA2ACP1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ttc39aA2ACP1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ttc39aA2ACP1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ttc39aA2ACP1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ttc39aA2ACP1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ttc39aA2ACP1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ttc39aA2ACP1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Ttc39aA2ACP1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ttc39aA2ACP1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ttc39aA2ACP1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ttc39aA2ACP1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ttc39aA2ACP1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ttc39aA2ACP1 Gm10418-201ENSMUST00000100943 576 ntBASIC17.33■□□□□ 0.36
Ttc39aA2ACP1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ttc39aA2ACP1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ttc39aA2ACP1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ttc39aA2ACP1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ttc39aA2ACP1 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.33■□□□□ 0.36
Ttc39aA2ACP1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ttc39aA2ACP1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ttc39aA2ACP1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ttc39aA2ACP1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Ttc39aA2ACP1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ttc39aA2ACP1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ttc39aA2ACP1 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.32■□□□□ 0.36
Ttc39aA2ACP1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.32■□□□□ 0.36
Ttc39aA2ACP1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ttc39aA2ACP1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ttc39aA2ACP1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ttc39aA2ACP1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ttc39aA2ACP1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.32■□□□□ 0.36
Ttc39aA2ACP1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ttc39aA2ACP1 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.32■□□□□ 0.36
Ttc39aA2ACP1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ttc39aA2ACP1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ttc39aA2ACP1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc39aA2ACP1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc39aA2ACP1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc39aA2ACP1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc39aA2ACP1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc39aA2ACP1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc39aA2ACP1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc39aA2ACP1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.31■□□□□ 0.36
Ttc39aA2ACP1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc39aA2ACP1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc39aA2ACP1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.31■□□□□ 0.36
Ttc39aA2ACP1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc39aA2ACP1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc39aA2ACP1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Ttc39aA2ACP1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc39aA2ACP1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc39aA2ACP1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Ttc39aA2ACP1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc39aA2ACP1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.3■□□□□ 0.36
Ttc39aA2ACP1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms