Protein–RNA interactions for Protein: A0A140T8Q4

Igkv3-4, Immunoglobulin kappa variable 3-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-4A0A140T8Q4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-4A0A140T8Q4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC11.14□□□□□ -0.63
Igkv3-4A0A140T8Q4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-4A0A140T8Q4 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-4A0A140T8Q4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-4A0A140T8Q4 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-4A0A140T8Q4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-4A0A140T8Q4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-4A0A140T8Q4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-4A0A140T8Q4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-4A0A140T8Q4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-4A0A140T8Q4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-4A0A140T8Q4 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 Gm11421-201ENSMUST00000122124 294 ntBASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 Gm8969-201ENSMUST00000199694 526 ntBASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-4A0A140T8Q4 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-4A0A140T8Q4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC11.12□□□□□ -0.63
Igkv3-4A0A140T8Q4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-4A0A140T8Q4 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC11.12□□□□□ -0.63
Igkv3-4A0A140T8Q4 Gm45244-201ENSMUST00000211328 2200 ntBASIC11.12□□□□□ -0.63
Igkv3-4A0A140T8Q4 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-4A0A140T8Q4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-4A0A140T8Q4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-4A0A140T8Q4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-4A0A140T8Q4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC11.12□□□□□ -0.63
Igkv3-4A0A140T8Q4 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-4A0A140T8Q4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-4A0A140T8Q4 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-4A0A140T8Q4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Igkv3-4A0A140T8Q4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Igkv3-4A0A140T8Q4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-4A0A140T8Q4 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC11.12□□□□□ -0.63
Igkv3-4A0A140T8Q4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-4A0A140T8Q4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-4A0A140T8Q4 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-4A0A140T8Q4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Igkv3-4A0A140T8Q4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-4A0A140T8Q4 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-4A0A140T8Q4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Igkv3-4A0A140T8Q4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-4A0A140T8Q4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-4A0A140T8Q4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-4A0A140T8Q4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC11.1□□□□□ -0.63
Igkv3-4A0A140T8Q4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-4A0A140T8Q4 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Igkv3-4A0A140T8Q4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms