Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 Gm4968-201ENSMUST00000071458 858 ntBASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-2A0A140T8N6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-2A0A140T8N6 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-2A0A140T8N6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-2A0A140T8N6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-2A0A140T8N6 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
Trbv13-2A0A140T8N6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-2A0A140T8N6 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trbv13-2A0A140T8N6 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC12.38□□□□□ -0.43
Trbv13-2A0A140T8N6 Gm15847-201ENSMUST00000121417 1065 ntBASIC12.38□□□□□ -0.43
Trbv13-2A0A140T8N6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-2A0A140T8N6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.38□□□□□ -0.43
Trbv13-2A0A140T8N6 Gm2559-201ENSMUST00000201323 363 ntBASIC12.38□□□□□ -0.43
Trbv13-2A0A140T8N6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-2A0A140T8N6 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-2A0A140T8N6 Gm42939-201ENSMUST00000197514 2205 ntBASIC12.38□□□□□ -0.43
Trbv13-2A0A140T8N6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-2A0A140T8N6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-2A0A140T8N6 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC12.38□□□□□ -0.43
Trbv13-2A0A140T8N6 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-2A0A140T8N6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-2A0A140T8N6 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trbv13-2A0A140T8N6 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-2A0A140T8N6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-2A0A140T8N6 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-2A0A140T8N6 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-2A0A140T8N6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-2A0A140T8N6 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Trbv13-2A0A140T8N6 Gm38285-201ENSMUST00000192928 922 ntBASIC12.37□□□□□ -0.43
Trbv13-2A0A140T8N6 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-2A0A140T8N6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-2A0A140T8N6 Zfp783-201ENSMUST00000095946 670 ntBASIC12.37□□□□□ -0.43
Trbv13-2A0A140T8N6 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trbv13-2A0A140T8N6 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-2A0A140T8N6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-2A0A140T8N6 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trbv13-2A0A140T8N6 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-2A0A140T8N6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-2A0A140T8N6 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-2A0A140T8N6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trbv13-2A0A140T8N6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-2A0A140T8N6 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trbv13-2A0A140T8N6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-2A0A140T8N6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trbv13-2A0A140T8N6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trbv13-2A0A140T8N6 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Gm29257-201ENSMUST00000186115 639 ntBASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-2A0A140T8N6 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trbv13-2A0A140T8N6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-2A0A140T8N6 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-2A0A140T8N6 Dmtn-207ENSMUST00000228001 2437 ntBASIC12.35□□□□□ -0.43
Trbv13-2A0A140T8N6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-2A0A140T8N6 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-2A0A140T8N6 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-2A0A140T8N6 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC12.35□□□□□ -0.43
Trbv13-2A0A140T8N6 Gm12896-201ENSMUST00000118430 226 ntBASIC12.35□□□□□ -0.43
Trbv13-2A0A140T8N6 Gm12441-201ENSMUST00000121806 588 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms