Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cfap99A0A140LIX9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cfap99A0A140LIX9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cfap99A0A140LIX9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cfap99A0A140LIX9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.24■□□□□ 0.99
Cfap99A0A140LIX9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cfap99A0A140LIX9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cfap99A0A140LIX9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cfap99A0A140LIX9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cfap99A0A140LIX9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cfap99A0A140LIX9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cfap99A0A140LIX9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cfap99A0A140LIX9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC21.24■□□□□ 0.99
Cfap99A0A140LIX9 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.24■□□□□ 0.99
Cfap99A0A140LIX9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cfap99A0A140LIX9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Cfap99A0A140LIX9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cfap99A0A140LIX9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cfap99A0A140LIX9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cfap99A0A140LIX9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cfap99A0A140LIX9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cfap99A0A140LIX9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC21.23■□□□□ 0.99
Cfap99A0A140LIX9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.23■□□□□ 0.99
Cfap99A0A140LIX9 Gm43799-201ENSMUST00000201845 579 ntBASIC21.23■□□□□ 0.99
Cfap99A0A140LIX9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cfap99A0A140LIX9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cfap99A0A140LIX9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cfap99A0A140LIX9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cfap99A0A140LIX9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cfap99A0A140LIX9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cfap99A0A140LIX9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cfap99A0A140LIX9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cfap99A0A140LIX9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cfap99A0A140LIX9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.22■□□□□ 0.99
Cfap99A0A140LIX9 Mtag2-201ENSMUST00000058665 714 ntBASIC21.22■□□□□ 0.99
Cfap99A0A140LIX9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cfap99A0A140LIX9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cfap99A0A140LIX9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cfap99A0A140LIX9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cfap99A0A140LIX9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cfap99A0A140LIX9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cfap99A0A140LIX9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cfap99A0A140LIX9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cfap99A0A140LIX9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cfap99A0A140LIX9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Cfap99A0A140LIX9 Gm10231-201ENSMUST00000181584 441 ntBASIC21.21■□□□□ 0.99
Cfap99A0A140LIX9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cfap99A0A140LIX9 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.21■□□□□ 0.99
Cfap99A0A140LIX9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.21■□□□□ 0.99
Cfap99A0A140LIX9 Gm10175-202ENSMUST00000208752 441 ntBASIC21.21■□□□□ 0.99
Cfap99A0A140LIX9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cfap99A0A140LIX9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cfap99A0A140LIX9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cfap99A0A140LIX9 Zfp783-201ENSMUST00000095946 670 ntBASIC21.21■□□□□ 0.99
Cfap99A0A140LIX9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Cfap99A0A140LIX9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Cfap99A0A140LIX9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.21■□□□□ 0.99
Cfap99A0A140LIX9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cfap99A0A140LIX9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC21.21■□□□□ 0.99
Cfap99A0A140LIX9 Grk6-206ENSMUST00000224995 2971 ntBASIC21.21■□□□□ 0.99
Cfap99A0A140LIX9 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.21■□□□□ 0.99
Cfap99A0A140LIX9 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.21■□□□□ 0.99
Cfap99A0A140LIX9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.2■□□□□ 0.99
Cfap99A0A140LIX9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cfap99A0A140LIX9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cfap99A0A140LIX9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC21.2■□□□□ 0.98
Cfap99A0A140LIX9 Gm43183-201ENSMUST00000200632 547 ntBASIC21.2■□□□□ 0.98
Cfap99A0A140LIX9 Gm10138-203ENSMUST00000206952 366 ntBASIC21.2■□□□□ 0.98
Cfap99A0A140LIX9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Cfap99A0A140LIX9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cfap99A0A140LIX9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cfap99A0A140LIX9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.2■□□□□ 0.98
Cfap99A0A140LIX9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.2■□□□□ 0.98
Cfap99A0A140LIX9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cfap99A0A140LIX9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cfap99A0A140LIX9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cfap99A0A140LIX9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cfap99A0A140LIX9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cfap99A0A140LIX9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.19■□□□□ 0.98
Cfap99A0A140LIX9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cfap99A0A140LIX9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cfap99A0A140LIX9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cfap99A0A140LIX9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.19■□□□□ 0.98
Cfap99A0A140LIX9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC21.19■□□□□ 0.98
Cfap99A0A140LIX9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Cfap99A0A140LIX9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Cfap99A0A140LIX9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cfap99A0A140LIX9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cfap99A0A140LIX9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cfap99A0A140LIX9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.19■□□□□ 0.98
Cfap99A0A140LIX9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cfap99A0A140LIX9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cfap99A0A140LIX9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cfap99A0A140LIX9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cfap99A0A140LIX9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cfap99A0A140LIX9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cfap99A0A140LIX9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cfap99A0A140LIX9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cfap99A0A140LIX9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cfap99A0A140LIX9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms