Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgb8A0A140LI48 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgb8A0A140LI48 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgb8A0A140LI48 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgb8A0A140LI48 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgb8A0A140LI48 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgb8A0A140LI48 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgb8A0A140LI48 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.04■□□□□ 0.16
Pcdhgb8A0A140LI48 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgb8A0A140LI48 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.04■□□□□ 0.16
Pcdhgb8A0A140LI48 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgb8A0A140LI48 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhgb8A0A140LI48 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhgb8A0A140LI48 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgb8A0A140LI48 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgb8A0A140LI48 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgb8A0A140LI48 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.04■□□□□ 0.16
Pcdhgb8A0A140LI48 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgb8A0A140LI48 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhgb8A0A140LI48 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgb8A0A140LI48 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.03■□□□□ 0.16
Pcdhgb8A0A140LI48 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgb8A0A140LI48 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgb8A0A140LI48 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgb8A0A140LI48 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgb8A0A140LI48 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgb8A0A140LI48 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgb8A0A140LI48 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.03■□□□□ 0.16
Pcdhgb8A0A140LI48 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgb8A0A140LI48 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgb8A0A140LI48 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhgb8A0A140LI48 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgb8A0A140LI48 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgb8A0A140LI48 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgb8A0A140LI48 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgb8A0A140LI48 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgb8A0A140LI48 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgb8A0A140LI48 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgb8A0A140LI48 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgb8A0A140LI48 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgb8A0A140LI48 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgb8A0A140LI48 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Pcdhgb8A0A140LI48 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Pcdhgb8A0A140LI48 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgb8A0A140LI48 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Pcdhgb8A0A140LI48 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgb8A0A140LI48 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhgb8A0A140LI48 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhgb8A0A140LI48 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhgb8A0A140LI48 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhgb8A0A140LI48 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhgb8A0A140LI48 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Pcdhgb8A0A140LI48 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhgb8A0A140LI48 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhgb8A0A140LI48 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb8A0A140LI48 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb8A0A140LI48 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb8A0A140LI48 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb8A0A140LI48 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb8A0A140LI48 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb8A0A140LI48 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb8A0A140LI48 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb8A0A140LI48 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb8A0A140LI48 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhgb8A0A140LI48 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.01■□□□□ 0.15
Pcdhgb8A0A140LI48 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.01■□□□□ 0.15
Pcdhgb8A0A140LI48 Gm6420-201ENSMUST00000193885 723 ntBASIC16.01■□□□□ 0.15
Pcdhgb8A0A140LI48 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb8A0A140LI48 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb8A0A140LI48 Gm6365-201ENSMUST00000054711 744 ntBASIC16.01■□□□□ 0.15
Pcdhgb8A0A140LI48 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhgb8A0A140LI48 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhgb8A0A140LI48 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb8A0A140LI48 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.01■□□□□ 0.15
Pcdhgb8A0A140LI48 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb8A0A140LI48 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb8A0A140LI48 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb8A0A140LI48 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhgb8A0A140LI48 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdhgb8A0A140LI48 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb8A0A140LI48 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb8A0A140LI48 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb8A0A140LI48 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Pcdhgb8A0A140LI48 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb8A0A140LI48 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb8A0A140LI48 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16■□□□□ 0.15
Pcdhgb8A0A140LI48 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb8A0A140LI48 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb8A0A140LI48 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb8A0A140LI48 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Pcdhgb8A0A140LI48 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16■□□□□ 0.15
Pcdhgb8A0A140LI48 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb8A0A140LI48 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb8A0A140LI48 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb8A0A140LI48 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb8A0A140LI48 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb8A0A140LI48 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhgb8A0A140LI48 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhgb8A0A140LI48 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhgb8A0A140LI48 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms