Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav4-3A0A0B4J1K1 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav4-3A0A0B4J1K1 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav4-3A0A0B4J1K1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav4-3A0A0B4J1K1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-3A0A0B4J1K1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-3A0A0B4J1K1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Trav4-3A0A0B4J1K1 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.14□□□□□ -0.47
Trav4-3A0A0B4J1K1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-3A0A0B4J1K1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-3A0A0B4J1K1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-3A0A0B4J1K1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC12.14□□□□□ -0.47
Trav4-3A0A0B4J1K1 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav4-3A0A0B4J1K1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-3A0A0B4J1K1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-3A0A0B4J1K1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav4-3A0A0B4J1K1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Trav4-3A0A0B4J1K1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-3A0A0B4J1K1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-3A0A0B4J1K1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-3A0A0B4J1K1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-3A0A0B4J1K1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-3A0A0B4J1K1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-3A0A0B4J1K1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav4-3A0A0B4J1K1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav4-3A0A0B4J1K1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-3A0A0B4J1K1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav4-3A0A0B4J1K1 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-3A0A0B4J1K1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-3A0A0B4J1K1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-3A0A0B4J1K1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-3A0A0B4J1K1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav4-3A0A0B4J1K1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav4-3A0A0B4J1K1 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav4-3A0A0B4J1K1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav4-3A0A0B4J1K1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Trav4-3A0A0B4J1K1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-3A0A0B4J1K1 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-3A0A0B4J1K1 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-3A0A0B4J1K1 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav4-3A0A0B4J1K1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-3A0A0B4J1K1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav4-3A0A0B4J1K1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-3A0A0B4J1K1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav4-3A0A0B4J1K1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav4-3A0A0B4J1K1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-3A0A0B4J1K1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-3A0A0B4J1K1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav4-3A0A0B4J1K1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-3A0A0B4J1K1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-3A0A0B4J1K1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-3A0A0B4J1K1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-3A0A0B4J1K1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-3A0A0B4J1K1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-3A0A0B4J1K1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav4-3A0A0B4J1K1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-3A0A0B4J1K1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-3A0A0B4J1K1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-3A0A0B4J1K1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav4-3A0A0B4J1K1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-3A0A0B4J1K1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-3A0A0B4J1K1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-3A0A0B4J1K1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-3A0A0B4J1K1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-3A0A0B4J1K1 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-3A0A0B4J1K1 Gm8309-201ENSMUST00000206627 1448 ntBASIC12.11□□□□□ -0.47
Trav4-3A0A0B4J1K1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-3A0A0B4J1K1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-3A0A0B4J1K1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Trav4-3A0A0B4J1K1 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav4-3A0A0B4J1K1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-3A0A0B4J1K1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-3A0A0B4J1K1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-3A0A0B4J1K1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-3A0A0B4J1K1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav4-3A0A0B4J1K1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-3A0A0B4J1K1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav4-3A0A0B4J1K1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-3A0A0B4J1K1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-3A0A0B4J1K1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-3A0A0B4J1K1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-3A0A0B4J1K1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC12.11□□□□□ -0.47
Trav4-3A0A0B4J1K1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-3A0A0B4J1K1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-3A0A0B4J1K1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav4-3A0A0B4J1K1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-3A0A0B4J1K1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-3A0A0B4J1K1 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-3A0A0B4J1K1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav4-3A0A0B4J1K1 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-3A0A0B4J1K1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
Trav4-3A0A0B4J1K1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-3A0A0B4J1K1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav4-3A0A0B4J1K1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.1□□□□□ -0.47
Trav4-3A0A0B4J1K1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-3A0A0B4J1K1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-3A0A0B4J1K1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-3A0A0B4J1K1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-3A0A0B4J1K1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav4-3A0A0B4J1K1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms