Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-42A0A0A6YY38 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ighv1-42A0A0A6YY38 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-42A0A0A6YY38 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-42A0A0A6YY38 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-42A0A0A6YY38 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-42A0A0A6YY38 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ighv1-42A0A0A6YY38 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ighv1-42A0A0A6YY38 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-42A0A0A6YY38 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-42A0A0A6YY38 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ighv1-42A0A0A6YY38 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Ighv1-42A0A0A6YY38 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-42A0A0A6YY38 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.4■□□□□ 0.22
Ighv1-42A0A0A6YY38 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-42A0A0A6YY38 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.4■□□□□ 0.22
Ighv1-42A0A0A6YY38 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-42A0A0A6YY38 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-42A0A0A6YY38 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Ighv1-42A0A0A6YY38 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-42A0A0A6YY38 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-42A0A0A6YY38 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.39■□□□□ 0.21
Ighv1-42A0A0A6YY38 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ighv1-42A0A0A6YY38 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ighv1-42A0A0A6YY38 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.39■□□□□ 0.21
Ighv1-42A0A0A6YY38 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-42A0A0A6YY38 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.39■□□□□ 0.21
Ighv1-42A0A0A6YY38 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ighv1-42A0A0A6YY38 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ighv1-42A0A0A6YY38 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-42A0A0A6YY38 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ighv1-42A0A0A6YY38 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ighv1-42A0A0A6YY38 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-42A0A0A6YY38 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-42A0A0A6YY38 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ighv1-42A0A0A6YY38 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-42A0A0A6YY38 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-42A0A0A6YY38 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ighv1-42A0A0A6YY38 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-42A0A0A6YY38 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-42A0A0A6YY38 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Ighv1-42A0A0A6YY38 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-42A0A0A6YY38 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.38■□□□□ 0.21
Ighv1-42A0A0A6YY38 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.38■□□□□ 0.21
Ighv1-42A0A0A6YY38 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ighv1-42A0A0A6YY38 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-42A0A0A6YY38 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-42A0A0A6YY38 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-42A0A0A6YY38 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-42A0A0A6YY38 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Ighv1-42A0A0A6YY38 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-42A0A0A6YY38 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-42A0A0A6YY38 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-42A0A0A6YY38 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ighv1-42A0A0A6YY38 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-42A0A0A6YY38 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-42A0A0A6YY38 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.38■□□□□ 0.21
Ighv1-42A0A0A6YY38 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-42A0A0A6YY38 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-42A0A0A6YY38 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-42A0A0A6YY38 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-42A0A0A6YY38 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-42A0A0A6YY38 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-42A0A0A6YY38 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.37■□□□□ 0.21
Ighv1-42A0A0A6YY38 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ighv1-42A0A0A6YY38 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-42A0A0A6YY38 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-42A0A0A6YY38 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-42A0A0A6YY38 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.37■□□□□ 0.21
Ighv1-42A0A0A6YY38 Gm24841-201ENSMUST00000158676 357 ntBASIC16.37■□□□□ 0.21
Ighv1-42A0A0A6YY38 Gm2274-201ENSMUST00000184539 609 ntBASIC16.37■□□□□ 0.21
Ighv1-42A0A0A6YY38 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Ighv1-42A0A0A6YY38 Gm45058-201ENSMUST00000205810 766 ntBASIC16.37■□□□□ 0.21
Ighv1-42A0A0A6YY38 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-42A0A0A6YY38 Golph3-205ENSMUST00000228671 2842 ntBASIC16.37■□□□□ 0.21
Ighv1-42A0A0A6YY38 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-42A0A0A6YY38 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-42A0A0A6YY38 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Ighv1-42A0A0A6YY38 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-42A0A0A6YY38 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.37■□□□□ 0.21
Ighv1-42A0A0A6YY38 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Ighv1-42A0A0A6YY38 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-42A0A0A6YY38 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-42A0A0A6YY38 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-42A0A0A6YY38 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-42A0A0A6YY38 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-42A0A0A6YY38 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-42A0A0A6YY38 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-42A0A0A6YY38 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-42A0A0A6YY38 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.36■□□□□ 0.21
Ighv1-42A0A0A6YY38 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-42A0A0A6YY38 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-42A0A0A6YY38 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-42A0A0A6YY38 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Ighv1-42A0A0A6YY38 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.36■□□□□ 0.21
Ighv1-42A0A0A6YY38 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.36■□□□□ 0.21
Ighv1-42A0A0A6YY38 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.36■□□□□ 0.21
Ighv1-42A0A0A6YY38 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-42A0A0A6YY38 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-42A0A0A6YY38 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms